| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3161 |
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| Symbol | |
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| ID | 8359326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3896150 |
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| End bp | 3896692 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965333 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122829 |
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| Protein GI | 256422176 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0186021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATCGA CAAATGATAT TGAATTATTA CAGCTTATAA AATCGGCGGA TGAATCAGCA
TTCGTTGAGT TGCATGACCG TTATCATAGG GTCATGTTCC TGGAAGCGCG CAATCGCCTC
GAAAGTGAGG ACGAGGCGAA GGACGCTGTG CAGGAAATTT TTATGTGGGT ATGGGAAAAA
CGCCATAAAA TTAATATCCA GCACTCCTTT CGGGCTTATC TTCTACAGGC TATACGGTTT
CATTGCTCTA AACGTATTCA GGCGGAGTCT TCTTTGAGAA AGAAGCAGAA AAGGTATTCG
GAGGGAATGA TGGAGATCTT TACCAGCAGC CTGCCAGTGG AGAATAAGGA GCTGAACCAG
CAGATTCGGG CGGCCATGGA AAAGGTATCA CCGGCCCGGA GGGCGGCTTT TAAGAAGGTG
TACCTGGATG GAAAGTCGCT AAAGGAAGTG GCGGAGGAGC TCGGCATCAG CATTTATACG
GCGAAGAATA ATATTATTAA TGCGGTGAAA ACCCTCAGGG AGAACCTGAA AAATTTACAT
TAA
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| Protein sequence | MQSTNDIELL QLIKSADESA FVELHDRYHR VMFLEARNRL ESEDEAKDAV QEIFMWVWEK
RHKINIQHSF RAYLLQAIRF HCSKRIQAES SLRKKQKRYS EGMMEIFTSS LPVENKELNQ
QIRAAMEKVS PARRAAFKKV YLDGKSLKEV AEELGISIYT AKNNIINAVK TLRENLKNLH
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