Gene Cpin_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3145 
Symbol 
ID8359310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3876636 
End bp3877448 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content50% 
IMG OID644965317 
Productputative competence protein 
Protein accessionYP_003122813 
Protein GI256422160 
COG category[R] General function prediction only 
COG ID[COG4469] Competence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTTG CCTATGTAAA CAACAAACTC ACCCCGGCCG CTCCGAAGTT AAAAGGTACC 
TGTCCGGGCT GTACGCAGCC GGTAACCGCC AAATGCGGCA CAAAAAGAAT ACACCACTGG
GCGCATCAAA CCACTGAAAT GTGCGATCGC TGGTGGGAGC CTGAAACCGC TTGGCACCGG
GCATGGAAAA ATAATTTCCC TTTAGCATGG CAGGAAGTGT TTCTGCCCGA CGAACGGACC
GACGAAAAAC ACATTGCCGA TCTATGTACC AGTCATGGCC TTACCATAGA GTTTCAGCAC
TCAGCTATTG ATCCGGAAGA ACGAGCCAGC CGTGAAGCGT TTTATCACAA CCTGATCTGG
GTAGTGGATG GCACAAGGCT AAAGGGCGAT TTTCCCCGTT TCCTTGGGAT AAGAAAGGAT
CTTCAGGTGG TAGCACAGCG GACATTCCGC GTTAACCGCC CTGATGAATA CTTCCCATCA
GCATGGGTGG GAAGCTCCGT TCCCGTCTTT TTCGATTTTT GGGGAGATGG ATCGATGGAG
GATAACCAGG ATGTTAGAAA TAGCATTTAT TGCTTATTCC CTACCCGGAT AGGAACAGCG
GCGATACTTG TTGAATGGCA TCGCTCAGCG TTCATAGAAG CGGCCAAAAA CGGTAAATTG
CTGTCGTGGG TTACCACGTC TATACACAAC ATAAAAACGG CAAGTGAAGA AGAGCAACTC
CAAAGAGCTA AACTGCAACA GCAACAGGAG AGGATCAACT ATGAAAGATT TTCCAGAATG
GGACGATATC CGCAACGGCG GCGGCGTTTC TAA
 
Protein sequence
MRLAYVNNKL TPAAPKLKGT CPGCTQPVTA KCGTKRIHHW AHQTTEMCDR WWEPETAWHR 
AWKNNFPLAW QEVFLPDERT DEKHIADLCT SHGLTIEFQH SAIDPEERAS REAFYHNLIW
VVDGTRLKGD FPRFLGIRKD LQVVAQRTFR VNRPDEYFPS AWVGSSVPVF FDFWGDGSME
DNQDVRNSIY CLFPTRIGTA AILVEWHRSA FIEAAKNGKL LSWVTTSIHN IKTASEEEQL
QRAKLQQQQE RINYERFSRM GRYPQRRRRF