Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3145 |
Symbol | |
ID | 8359310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3876636 |
End bp | 3877448 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644965317 |
Product | putative competence protein |
Protein accession | YP_003122813 |
Protein GI | 256422160 |
COG category | [R] General function prediction only |
COG ID | [COG4469] Competence protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACTTG CCTATGTAAA CAACAAACTC ACCCCGGCCG CTCCGAAGTT AAAAGGTACC TGTCCGGGCT GTACGCAGCC GGTAACCGCC AAATGCGGCA CAAAAAGAAT ACACCACTGG GCGCATCAAA CCACTGAAAT GTGCGATCGC TGGTGGGAGC CTGAAACCGC TTGGCACCGG GCATGGAAAA ATAATTTCCC TTTAGCATGG CAGGAAGTGT TTCTGCCCGA CGAACGGACC GACGAAAAAC ACATTGCCGA TCTATGTACC AGTCATGGCC TTACCATAGA GTTTCAGCAC TCAGCTATTG ATCCGGAAGA ACGAGCCAGC CGTGAAGCGT TTTATCACAA CCTGATCTGG GTAGTGGATG GCACAAGGCT AAAGGGCGAT TTTCCCCGTT TCCTTGGGAT AAGAAAGGAT CTTCAGGTGG TAGCACAGCG GACATTCCGC GTTAACCGCC CTGATGAATA CTTCCCATCA GCATGGGTGG GAAGCTCCGT TCCCGTCTTT TTCGATTTTT GGGGAGATGG ATCGATGGAG GATAACCAGG ATGTTAGAAA TAGCATTTAT TGCTTATTCC CTACCCGGAT AGGAACAGCG GCGATACTTG TTGAATGGCA TCGCTCAGCG TTCATAGAAG CGGCCAAAAA CGGTAAATTG CTGTCGTGGG TTACCACGTC TATACACAAC ATAAAAACGG CAAGTGAAGA AGAGCAACTC CAAAGAGCTA AACTGCAACA GCAACAGGAG AGGATCAACT ATGAAAGATT TTCCAGAATG GGACGATATC CGCAACGGCG GCGGCGTTTC TAA
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Protein sequence | MRLAYVNNKL TPAAPKLKGT CPGCTQPVTA KCGTKRIHHW AHQTTEMCDR WWEPETAWHR AWKNNFPLAW QEVFLPDERT DEKHIADLCT SHGLTIEFQH SAIDPEERAS REAFYHNLIW VVDGTRLKGD FPRFLGIRKD LQVVAQRTFR VNRPDEYFPS AWVGSSVPVF FDFWGDGSME DNQDVRNSIY CLFPTRIGTA AILVEWHRSA FIEAAKNGKL LSWVTTSIHN IKTASEEEQL QRAKLQQQQE RINYERFSRM GRYPQRRRRF
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