Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3136 |
Symbol | |
ID | 8359301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3867477 |
End bp | 3868325 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965309 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003122805 |
Protein GI | 256422152 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.556145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA CTATATTGAT TACAGGTACC TCTACAGGAT TTGGCGCATC AGCAGTACAT TACTTCGCAC AAAAAGGCTG GAATGTAATT GCCACCATGC GTGACATCAC AAAAGCAGGA GACCTGCAAA ACATGGATCG TGTTTTCGTT ACAAAGCTGG ACGTACAGGA CAAATCAAGT ATCGAAACGG CTATCACAGG AGGTATTGAA CGCTTTGGTA ATATTGATGT GGTAGTGAAT AATGCCGGAT ATGGTCTCTT TGGTATTTTT GAAAGTATCT CTCCGGAAGG CATACAGGAT CAGTTTGCTG TCAATGTATT CGGCGCAATG GATGTTGTAA GAGCCATCCT CCCGCATTTC CGTGCAAAGA ACAACGGTAC GATCATTAAT ATCAGCTCAG GTGCCGGCGC CATAGGTTTC CCGATGGCCT CTGTTTACAG CGCTTCCAAA TTTGCGTTGG AAGGCTGGTC CGAAGGACTG AGATATGAAC TTGCATCCCT TGGCATCAAG GTAAAAATCG TTGAACCAGG CGGCGCAACA AAAACGGCTT TCATAGAACG TATGGGCGGG GAAAGCGCTG GCTTGCAGGC GATCGAAAAC TACATACCGT TCTTAGAGCA GATTGGTAAA GTATATGGCG GTATGGCAAC AGCTGCGGAC GCAGATGCCG TAGAAAAAGT GGTTACTGCC ATCTATGACG CTGCGACAGA CAACACCGAC ACACTCCGTT ATGCTCCTAC CAATGACATT CAAGCCCTGC TGAAAGCACG GCGTACGACT TCTGAAGAAG CTTACCAGCA ATTTACAAGC GGGGTATTCG CTCCGGCAGC TGAATCAGTC AGCCATTAA
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Protein sequence | MNKTILITGT STGFGASAVH YFAQKGWNVI ATMRDITKAG DLQNMDRVFV TKLDVQDKSS IETAITGGIE RFGNIDVVVN NAGYGLFGIF ESISPEGIQD QFAVNVFGAM DVVRAILPHF RAKNNGTIIN ISSGAGAIGF PMASVYSASK FALEGWSEGL RYELASLGIK VKIVEPGGAT KTAFIERMGG ESAGLQAIEN YIPFLEQIGK VYGGMATAAD ADAVEKVVTA IYDAATDNTD TLRYAPTNDI QALLKARRTT SEEAYQQFTS GVFAPAAESV SH
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