| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3131 |
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| Symbol | |
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| ID | 8359296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3859817 |
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| End bp | 3860839 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644965304 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003122800 |
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| Protein GI | 256422147 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.395332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.413116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGCA AAAATTTATA TAATCGTCGT CAGGCTATCG GGGGTATCGG AGTGGGGCTG
GCATCATTGA TGGTCAACCC GGCATTCAGT GCCTCTTCTG CTGGTGCTAC GGCAGGAAGT
ACGGCGGGAG CAGACGCTGG CGCAGGATTA GAAGACCCCG TTTCAAAATA CCCCAAACCT
CCGTTTAAAG AGCAATCTCA ACCCTGGCCG GGACTGGCCG CCAAAATGGA ACCCAGACCC
GATCATGGTG AAGCCAGTTA TAAAGGATCA AACCGGTTGG CCGGCAGAAA AGCATTGATT
ACAGGTGGTG ATTCAGGTAT GGGCCGTGCT GCCGCTATTG CCTATGCGCG TGAAGGTGCT
GACGTAGCCA TCAATTACCT GCCTGCTGAA GAAGAGGACG CAAAAGAAGT GGTGGAACTG
ATCAAAAAAG CCGGTCGCAA AGCAGTTGCT ATTCCCGGTG ATCTGCGGGA AGAAGCTTTT
TGTCAGAAAA TGGTAGCAGA GGCGGTTCGC CAATTGGGTG GCCTGGATAT CCTGGTAAAT
AATGCAGCAC GTCAGCAGAC GCAGAAAAGT ATCTTGGATA TTACCAGTGA GGCATTTGAT
GCCACCATGA AGACAAATAT TTATGCGCCG TTCTGGACCG TAAAGGCCGC TTTGCCACAC
CTGAAACCAG GTGCTGTGAT TATTGCTACT TCCAGCGAAC AGGCCACTGA TCCTTCCGCA
GAATTGTATG ATTACGCACA GACAAAAGCA GCCACTACCA GCTATGTAAA ATCACTGGCC
AAACAGCTGG CAGAAAAAGG TATTCGTGTG AATGGTGTAG CTCCTGGTCC TATCTGGACT
CCGCTGCAGG TAAGTGGCGG CGCGACTATG GAAAAACTAA AAAATTTCGG GGGAGATACG
CCTTTTAAAC GACCAGGACA ACCTGTCGAA CTGGCATCTA TTTATGTACA GCTGGCAGCT
AGTGATGGTA GTTATGCTAC CGGTCAGATC TATGGTGCTT CCGGAGGAAA CGGACAGCCT
TAA
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| Protein sequence | MDSKNLYNRR QAIGGIGVGL ASLMVNPAFS ASSAGATAGS TAGADAGAGL EDPVSKYPKP
PFKEQSQPWP GLAAKMEPRP DHGEASYKGS NRLAGRKALI TGGDSGMGRA AAIAYAREGA
DVAINYLPAE EEDAKEVVEL IKKAGRKAVA IPGDLREEAF CQKMVAEAVR QLGGLDILVN
NAARQQTQKS ILDITSEAFD ATMKTNIYAP FWTVKAALPH LKPGAVIIAT SSEQATDPSA
ELYDYAQTKA ATTSYVKSLA KQLAEKGIRV NGVAPGPIWT PLQVSGGATM EKLKNFGGDT
PFKRPGQPVE LASIYVQLAA SDGSYATGQI YGASGGNGQP
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