| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3130 |
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| Symbol | |
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| ID | 8359295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3856104 |
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| End bp | 3859652 |
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| Gene Length | 3549 bp |
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| Protein Length | 1182 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965303 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003122799 |
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| Protein GI | 256422146 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.456841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.396058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATAC CTGTATTGTT TTATTTCCAC GGTTATGTAA AGCGGGATCC GTTGGATTAT
ACACCACTTT TTGCCCGTAT GCTCCTGGCG ATATTGATCA ATGCGATCCT CAGCGTGGGA
TTGTTCCTGC TGGCAGGACC ATCGCTGCAT TTCCGCACCA CAACGGTATT GATCGTTATG
GCTGTTGTTA ACAGCCTGTT GTATGGTCCG CTAAATATAT TACTCCGGAA ATGTTCTTCG
CTGGTCACCG CTCTGCTGGT ATTCGCCCCG TTTTTTCTAT ATGATCTGTA CCAGGAAAAT
CATTTCCGTC AAAGCAGCGC CCTGCATCCT GCCTGCTGGG AATACGACGG TCATTTTATA
TTCGCAGCGC TCCAGCCGCC GGTATTGCGG TTGTTGCTGA TATTCGCCTT ATATGCCCTT
ATTTTCGGCG TATTGTCTAT CTGGTTGTAC CGGATTGCGG CAAGGCTGCT GTTCGGGAAA
AAAGAGGATA TCACCGAACC TGATGAAAGG GCTTACAAAC TGTTTTTCAG CGAAGCGCGT
TCTTCCGAAA ATATTCCGAA ACCCCGCAGG GATTTTGCTT TTCTGGCACT GCGGATATTG
GGGTCTTTCT ATCTTTTTTA TCTGCTGGTA CTGATCATTG GCGTCCTGGG AGAACATGCC
TGGCCGGGTC AGGTACAACA GTTGATAAAG ATGACTTATG CTAATCCGGC ATTGGCCATC
AATACTTATT TTAAGATCAT CCTGATGACT ACGCTCGCTT TTGTGGCTGC GTATAATAAG
TCTCTGCGTT ATCACTGTTC TCTGGCATTA TTTGCTGGAC ATTCAGTGTC TACCGTCTAT
GCGCTGGTAT TCCATTATTG CAGGGCGTTG CAGGCATCGG ATCCTACTAA CTTTTTACTG
ACCTCTGCTA TCACAGACGG TGCTTTGCTG GTACTGTTTG TCTGGATGGC GATAGCGTAT
AAAAAAGCAG CAGCAATACA TGCAGCTGCG AGAGATCTGC CGATTAATTT TTCCGTACCG
CTTACACTGG TGAAATACCT GTATACCGGG ATGTCTGTAC TCTTCATGTT ATTTTGTGCA
GCTATTGTAC TGATTCGTTT AAAAGCATCA CCAGATGGCG GAATAGGAGC CGTTTATGGA
GCGCCGGATC CGATGGTCGG TAATACGGTT ACCTTGTATG CCACCCTGGC TGTATTGTGT
ATCTTCCTGA TCAATAAAGA AGCCCTACGT AATCATTTTT TTAATGCGCT GGTCATCCCA
TTATTGGCAG GTGGTAGTAT CGCGGTGTTA TGGCTGATCA CCGGTGATCT GAATGGCGGC
GTGTTTATCA CCACCAGATC CGGCGCAGGC GTACAGGTGA ACTGGTATTT CCCATTGTTT
GCATTAGTAC ATGCTTTACT GGCTACACTG ATGATCAGGA TCAGAAAAAT GTACTACGAT
ATTGATTATA CGACTAATAC TTTAAGTCCT TCTTCTGCCA TCAATGTGAT GGCATTGAGC
AATGCTTTTT TTAGCAGTGA TAACCAGCAA CAGGCAAGTG ACCTGGAACT GGTTGATAAA
TATGCGGGTG GTATCAAAGG GCGTAAAAGA GGATTACTGA ACCTGCCTTT TGCACTCTTC
GAAAATGTAT TGAACCTGGT CTATGGCATC CGGCCCTGTT TTTCTTCCAT GCAAAGGGAT
GAACAACGGT ACTATCTGAG CCGCTATTTC TTCCGTAATG AATGGCAGCG TAAACGGGCA
TTTATTCCCC CATTGGCGGA GCTGGCGTAT CAGATAGGAT TGTCCCTGAA TTCCATCATC
ATGTTTGCAA ATTTCTCTAC TATCAATGTG CGTAATGCCA TGGGGTATGT ACCTGTCAAT
GCGAGAGATC GTACACAGGG TGATATGCCT GCTTATCCGC CGCCGCATGA AAGTATTGCA
CGGCTGCCGC ATGATGAAAA AGATCCGGCT AATTTCAAGC CTGCCGGTAT AGCGGAAAAA
GAAGAAGTAG CACCGAGAGT AACCACACCT GTGAAAGAGG AAAAACTGCC ACAGGAGGTG
GATTATTTTA TTGTCGGTTC GGGTGCGGGA GGGGCCGTGG CTGCCTACAG ACTGGCATGT
ACAGTAGCAA ATCCCGGAAG TATCCTATTG CTGGAAAGAG GAACCCGTTA TCAGCCTTTA
CAGGATTTCC AGGATACGGA GATAGAGATG ATGAAGAAGG TCTATAAGGA AGGCGGATTA
CAGCAGACAA AAACCTTCAG CATGACCCTT TTACAAGGAG AATGCGTAGG TGGTACGACT
GTTGTCAACA ATGCCGTTTG TTTTACGATA CCTAATACGA TCAGGGAAAT ATGGCAACAG
CAGTATGATA TAGATTTGTC CGGACTGGAT ATGGAATATC AACAGATTGC TGCTGAATTG
TCGATTAAAC CACTGGAAGC AAATGGCGTA AACAGGGAGG TTGCCGCCAG GTTCAGTCAG
GCAGTTGAAC GATATAACCG GACCGCCGCA GATAAGCTGA TCACCACCTT TCCGGTACTG
GTCAATCACC TGCATACAAT GGGAGACGGT AACTGGAATT TAGGAAATAA ACGGATGCGT
AAGCGCAGTA TGCTGGAAAC CTATATTCCC TGGGCGGAAT CAAGGGGCGT AAAGGTCATT
CCTAATATGA CGGCAGTACA GTTCATCGAA GATCCTGCAC AGCCGGGAAG GGCCGGAGAA
GTGATAGTAC GTGCGGATAA TGGCAATTTA CAGCGGGTAA AAGTGAGGAA GGCGGTCATT
GTTGCCGGCG GAGTGATTTC CAGCAGCCAT TTCCTGATGC GCAGTGGCGT TAAGAACGAG
AATATAGGTA AACGTCTGAG CTGCAATTTT GCCTTACCGG TGGCCTTTGA ATTTGACCGC
CCTGTCAGGG CGTATGATGG CGATCAGATC ACGATGGCTG CGATGGACAG TAAGGGCAGG
GCTATTTTTG AGACGTATTT CAATCCGCCT GCCTCTTTTG GTCTTAGCAG CATCCCTTTC
TTTTTTGACC GCAGAGACGC TATTACAGGC CGTTATTGCT ATTATCTCAA CCTGGGGGCA
CTCATTGGTT CATCCGCTGG GGGAGAGGTG CTTAAAAAGG CTGATTTGAT CAATGGACAG
GCATTTGTAT GGCAATTAGG TGAGGAAGAT ATTTCAAAGA TCAAGTTTGC CATTGAAAAA
CTGATAGAAT TAGGCCGGTT CGGGGGCGCT GTGAAAGCAG TGATTCCGAC AAAGCCAGGC
ATCGAAATAG ATCTCACCAA CGAAGACGAA GTTGACCGTT TTATCGGACA ATTATCCGGC
TTTCCCGTAA GGATGAAAGA CCTGCCCGTC AGTACAGCTC ACCCGCAGGG CGGTAACCTG
ATGGCGGGTA GTCAGTCGCC TCACCGTACA CAGCGTGTCG TAGATGAGTC TTTCTGCCTG
GAGGGTTATA ATAATGTGTT TGTAGCCGAT GCTTCCCTGT TCCCGGTTAG TATCACCGTC
AATCCCCAAT GGACGATCAT GGCCCTGAGT TCGCTGGCAT GTAAGCAGAT CGTCAGCCGG
TTTAAGTAA
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| Protein sequence | MHIPVLFYFH GYVKRDPLDY TPLFARMLLA ILINAILSVG LFLLAGPSLH FRTTTVLIVM
AVVNSLLYGP LNILLRKCSS LVTALLVFAP FFLYDLYQEN HFRQSSALHP ACWEYDGHFI
FAALQPPVLR LLLIFALYAL IFGVLSIWLY RIAARLLFGK KEDITEPDER AYKLFFSEAR
SSENIPKPRR DFAFLALRIL GSFYLFYLLV LIIGVLGEHA WPGQVQQLIK MTYANPALAI
NTYFKIILMT TLAFVAAYNK SLRYHCSLAL FAGHSVSTVY ALVFHYCRAL QASDPTNFLL
TSAITDGALL VLFVWMAIAY KKAAAIHAAA RDLPINFSVP LTLVKYLYTG MSVLFMLFCA
AIVLIRLKAS PDGGIGAVYG APDPMVGNTV TLYATLAVLC IFLINKEALR NHFFNALVIP
LLAGGSIAVL WLITGDLNGG VFITTRSGAG VQVNWYFPLF ALVHALLATL MIRIRKMYYD
IDYTTNTLSP SSAINVMALS NAFFSSDNQQ QASDLELVDK YAGGIKGRKR GLLNLPFALF
ENVLNLVYGI RPCFSSMQRD EQRYYLSRYF FRNEWQRKRA FIPPLAELAY QIGLSLNSII
MFANFSTINV RNAMGYVPVN ARDRTQGDMP AYPPPHESIA RLPHDEKDPA NFKPAGIAEK
EEVAPRVTTP VKEEKLPQEV DYFIVGSGAG GAVAAYRLAC TVANPGSILL LERGTRYQPL
QDFQDTEIEM MKKVYKEGGL QQTKTFSMTL LQGECVGGTT VVNNAVCFTI PNTIREIWQQ
QYDIDLSGLD MEYQQIAAEL SIKPLEANGV NREVAARFSQ AVERYNRTAA DKLITTFPVL
VNHLHTMGDG NWNLGNKRMR KRSMLETYIP WAESRGVKVI PNMTAVQFIE DPAQPGRAGE
VIVRADNGNL QRVKVRKAVI VAGGVISSSH FLMRSGVKNE NIGKRLSCNF ALPVAFEFDR
PVRAYDGDQI TMAAMDSKGR AIFETYFNPP ASFGLSSIPF FFDRRDAITG RYCYYLNLGA
LIGSSAGGEV LKKADLINGQ AFVWQLGEED ISKIKFAIEK LIELGRFGGA VKAVIPTKPG
IEIDLTNEDE VDRFIGQLSG FPVRMKDLPV STAHPQGGNL MAGSQSPHRT QRVVDESFCL
EGYNNVFVAD ASLFPVSITV NPQWTIMALS SLACKQIVSR FK
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