| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3124 |
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| Symbol | |
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| ID | 8359289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3845512 |
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| End bp | 3846978 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965297 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003122793 |
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| Protein GI | 256422140 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.115801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.453004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAACAA AAAATCGTTA TAAACTTTTA ATTATAGCTG CGGTACTGTT CACTTCCATG
ACTTCCTGCG ATAGCATCCT GGACGTAACA CCGAAAGGCA CCTATACGAC CGCTACCTAC
TGGCGTAACC AGTCAGACGC AGTTAATGGT ATTACCGGTA TTTACAACGT ACTGCTGGAA
GAAGATTTCA CGGGACATGC CGAGTTTACC TTTGATGATC CTTCTGACGA TCAGTACCGT
GCAGGTGACC ATTCTGAAGA TGTAGCCATC GAAAACCTTA CCTACGATGC AGCAAATGCA
CAGGTCCGTT TCGGCTGGAA ATGGAAATAT GAAATGATCA ACCGCGCAAA CAGTGCGTTG
ATATACATTC CAAAAATCAC TTCCATCGAC GAGGATATTA AAAACCGTTG TCTGGGTGAA
GCACGTTTCC TGCGTGCATT TGCATACTGG AGACTGATGC TGGTATACGG AGAAGCGCCG
GTAGTATCAG AAGACGATGT ACTGACAGGT AATTATAACA AACCGAAAGT AGGTATAGAC
AGTCTGCGCT CCATGATCCA GACGGACCTG CTGGCAGCGG CAGACTTACT GCCGGATAGT
TATGAAGGTG CTGACAGAGG TCGTGTATCA AAAGGTTCCG CATGGGGCTT ACTGTGTAAG
TTGTATATGT ACTGGGAAAA GCTGGATCAG GCAATCATCT ATGGTGAGAA AGTGATCAAC
AGCGGTAAGT ACAATCTTGC GCCGACTTAT GTAGCGAACT TCACACCAGA AACAAGTAAC
AATGATGAAA TGCTGTTTGC CGTGCAGACA AGCGATACCT GGGGTTACTC AGATTTCACT
ACTTACTATA CACCGCGTGA ATGGAACGGA TGGAACTTCC ACCAGCCACT GAAGCAACTG
GTAGATGAAT TCGAACAGAA TGATGCGCGT AAGGCAGTAT CGATCATGTC TCCTGGTGAT
AAGATCAATA TCGGTTCTTC TATCGCCACA TACAATGCAA ACATGTCAGA GACCGGTTAT
CACTTCCGTA AATTCTCTTA CTGGAAACCT AACGGTGGTC TGAACTATTC CCTGAAAACG
CCTTTATTGA GAACAGCAGA TATCATGTTG CTGGTAGCGG AAGCGAAGAT CCGTACCGCT
GGTGCGGGTG CAGGTGATAC AGAGATCAAT AAAGTGCGTA AAAGAGCGGG CCTGGGCGAT
GTAAGCGGCG CAGGTATGCC AGCCGTTATC CATGAACGTC GTATGGAACT GAGTGGTGAA
AATGAACGCC ATCAGGACCT GATGCGTTGG GACAAAGCAG GTCTGCTGGA TATTACCACT
TACTATAATA AGCCCAAATA TGGCAGAGAT GGTAATATCC TGGTGCAGGC ACGTAATTTC
ATCAGACCTA AGCATTATTA TTTCCCATTG CCCCAAACAG AGATTGATAA GAGCAATGGT
GTACTGAAGC AAAACGAGAA TTACTAA
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| Protein sequence | MTTKNRYKLL IIAAVLFTSM TSCDSILDVT PKGTYTTATY WRNQSDAVNG ITGIYNVLLE
EDFTGHAEFT FDDPSDDQYR AGDHSEDVAI ENLTYDAANA QVRFGWKWKY EMINRANSAL
IYIPKITSID EDIKNRCLGE ARFLRAFAYW RLMLVYGEAP VVSEDDVLTG NYNKPKVGID
SLRSMIQTDL LAAADLLPDS YEGADRGRVS KGSAWGLLCK LYMYWEKLDQ AIIYGEKVIN
SGKYNLAPTY VANFTPETSN NDEMLFAVQT SDTWGYSDFT TYYTPREWNG WNFHQPLKQL
VDEFEQNDAR KAVSIMSPGD KINIGSSIAT YNANMSETGY HFRKFSYWKP NGGLNYSLKT
PLLRTADIML LVAEAKIRTA GAGAGDTEIN KVRKRAGLGD VSGAGMPAVI HERRMELSGE
NERHQDLMRW DKAGLLDITT YYNKPKYGRD GNILVQARNF IRPKHYYFPL PQTEIDKSNG
VLKQNENY
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