| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3118 |
|---|
| Symbol | |
|---|
| ID | 8359283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 3837829 |
|---|
| End bp | 3838368 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644965291 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003122787 |
|---|
| Protein GI | 256422134 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.666558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.338177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATG CAACATATCC TAATCCCGGT ATAAAATGGG GACTGATAGC CGCTGTAGTG
GTGATCGCTA CAGGTATAGC CCTGTATTAT ACCGATCAGC CTACGTTTTT CAGCCTGAAA
TTCAACTTTA TACAACTGCT TATATGTGCG ATTGCCGGCT TATTGGCTGG CCTCGAACAA
AAGAAACATC AGGGTGGCTT CATCGGTTTC AAAGCCGGGT TACAGCCTAT CTTTGCGACT
TTTGTTATCG GCACACTGGC AGGTACAGCC CTTACCTATA TCATTGTCAA CTTTGTAGAT
CCTGAACTGC CGGCCCGTAT GAAAGCCATG GACCTGAAGA TGCTGGAAGA GATGTCTAAA
ACCCATCAGG GGCCGGGTGT TACCGAAGCA GATCTCGACG CGCGACTGAC CGAACTGAAA
CAAAGCGACT ACAGCATCAC CTTCGTAAGA AGCATACTAT CCTATTTTAC CGGATTATTC
CTTGACTTTG TGATTGCTGC AATACTGGCG GTTGTTATCC GCAGAAAGCG TATTGCATAG
|
|---|
| Protein sequence | MSNATYPNPG IKWGLIAAVV VIATGIALYY TDQPTFFSLK FNFIQLLICA IAGLLAGLEQ
KKHQGGFIGF KAGLQPIFAT FVIGTLAGTA LTYIIVNFVD PELPARMKAM DLKMLEEMSK
THQGPGVTEA DLDARLTELK QSDYSITFVR SILSYFTGLF LDFVIAAILA VVIRRKRIA
|
|---|
| |