| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3093 |
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| Symbol | |
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| ID | 8359258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3809276 |
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| End bp | 3811021 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965267 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003122763 |
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| Protein GI | 256422110 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0434047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAT TTGAAACTTT AGGCTTACAG GAGCCCATCT TAAAAGGAAT CCAGGACCTG
GGATTTATTG CACCTACGCC AATTCAGGAA AAAGCTATTC CTGTGTTATT GGGTGGTGAC
CGGGACTTTG TAGGTTTGGC CCAGACGGGT ACAGGAAAGA CGGCAGCATT TGGCCTGCCG
CTGTTACAGC AGATCGATAT TAAACAACGT CATCCACAGG GATTGATTTT GTGTCCAACA
CGTGAATTAT GTTTGCAGAT CACCAATGAC CTGAAAAACT TCAGTAAACA CCTGGGTGAT
GTAAGCATCG TAGCGGTGTA TGGTGGTTCA AGCATCGTGC AGCAGCTGCG CGATCTGAAA
AGAGGAGTGC ACATCGTAGT GGCAACTCCC GGCCGTTTGC TCGATATCAT CGAAAGAAAG
GCAGTAAATT TTGCGAATGT ACGTTATGTT GTACTGGATG AAGCAGATGA AATGCTGAAT
ATGGGCTTCC AGGAAGACAT CAATAATATA TTATCCAATA CGCCTGAAGA GAAAACCACC
TGGTTGTTCT CAGCTACCAT GCCTCAGGAA GTACGCCGCA TTGCGCAGAA GTACATGTCA
GATCCTTTCG AACTGACCGT AGGTAATAAA AACAGCGGTA ACGCTAACAT CGAACACGAA
TACTACGTAG TACGTCCGCG TGAAAAATAC GCAGCACTGA AACGTATCGT GGATTACAAC
CCTGAGATTT TTGGTATCAT TTTTACCCGT ACTAAAATAG AATCACAGGA AATCGCGGAA
TCACTTATCC GTGACGGTTA TAATGCAGAT GCCCTGCATG GTGACCTGAC GCAGCAGCAG
CGTGATAAGG TAATGAAACG CTTCCGTGAA AAATCATTAC AGGTACTGGT AGCAACGGAC
GTTGCAGCCC GTGGTATCGA CGTTGACAAC GTAACACACG TAATCAACTA CGAACTGCCT
GATGATGTAG AAAACTACAC ACACCGTAGT GGTCGTACCG CACGTGCCGG TAAGTCTGGT
ATTTCCATCG CGATCATTAC TGGTCGTGAT ACCGGAAAGA TCCGTCAGAT CGAAAGAGTG
ATCGGTAAGA AATTCACTAA AGTAGACGTG CCTGATGGTT TCGCAGTATG TGAAAAACAA
CTGTTCGGCC TCGTTCATAA AGTGCACAAC GTAGTTGTAA ACGAAGAGCA GATCGAACCA
TACCTGGAAC GCATATTTGA AGAGTTTGCG TCCATGACCA AAGAAGAGAT CATCAAACGC
TTTGCTTCTC TTGAATTCAA TCAGTTCCTG GAATATTATC AGGATGCACC TGATCTGAAT
GTGAAAGAAG AAAGAAGATC TGCTGAAGGT GGAGAACGCA GAAGTAGCAA CGGTAAATTT
ACCCGTCTGT TTATCAACCT TGGTTCGGTA GATGACTTCA CCCGTGGTGA TATGTTACGT
TACCTGTGCG ACACCAGTGG TGTACGTGGT AACAAAATAG GTCGTATCGA TCTGAAAGGT
GTTTATTCCT TCTTCGAAGT AGAGAATGAT GTTGTGGAGA AATTCCAGCA GACCTTCAAG
AAAGCAGAAT ACAATGGTCG TAGCGTACGT ATCGAAATGT CTCAGGATGG CGATAAACGT
CGTTCGGGTG GCGGTGGCCG TCCTCCACGT GAAGGTGGTA GCGGTGGCAG ACGCTGGGAA
GGTAGCAACA GCGGTGGCGC AGGCGCCGGT GGCAGCCGTG CTGGTGGTTT CAGAAAGAGA
TACTAG
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| Protein sequence | MTTFETLGLQ EPILKGIQDL GFIAPTPIQE KAIPVLLGGD RDFVGLAQTG TGKTAAFGLP
LLQQIDIKQR HPQGLILCPT RELCLQITND LKNFSKHLGD VSIVAVYGGS SIVQQLRDLK
RGVHIVVATP GRLLDIIERK AVNFANVRYV VLDEADEMLN MGFQEDINNI LSNTPEEKTT
WLFSATMPQE VRRIAQKYMS DPFELTVGNK NSGNANIEHE YYVVRPREKY AALKRIVDYN
PEIFGIIFTR TKIESQEIAE SLIRDGYNAD ALHGDLTQQQ RDKVMKRFRE KSLQVLVATD
VAARGIDVDN VTHVINYELP DDVENYTHRS GRTARAGKSG ISIAIITGRD TGKIRQIERV
IGKKFTKVDV PDGFAVCEKQ LFGLVHKVHN VVVNEEQIEP YLERIFEEFA SMTKEEIIKR
FASLEFNQFL EYYQDAPDLN VKEERRSAEG GERRSSNGKF TRLFINLGSV DDFTRGDMLR
YLCDTSGVRG NKIGRIDLKG VYSFFEVEND VVEKFQQTFK KAEYNGRSVR IEMSQDGDKR
RSGGGGRPPR EGGSGGRRWE GSNSGGAGAG GSRAGGFRKR Y
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