Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3092 |
Symbol | |
ID | 8359257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3807845 |
End bp | 3809152 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965266 |
Product | MiaB-like tRNA modifying enzyme YliG |
Protein accession | YP_003122762 |
Protein GI | 256422109 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.949904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.038543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAGACAA AAACTTTAAA GAAAGATAAG GTTAATATTA TTACGCTTGG CTGTTCCAAG AATATGGTTG ATTCTGAAGT GCTCAGCGGT CAGTTACTGG CCAATGAAAT CGATGTGGTG CATGAAAGCG CCAAAAAGGA TCACAATATC GTTGTTGTAA ATACCTGTGG CTTTATTGAT AAGGCCAAGG AGGAATCTAT CAACACCATC CTGGAACAGA TTGAGTTGAA AAATCGGGGT CGCCTGGAGA AAGTATATGT AACAGGTTGT CTTAGCGAGC GTTATCGCGG AGACCTGGAA AGTGAAATTC CTGGTGTAGA TGCCTGGTTT GGTACAATGG AGTTGCCATT GATCCTGAAA AAGTTCGATG CTGATTATAA GGCAGAGCTG ATCGGTGAAC GTCTGCTGGC TACTCCTACG CACTATGCTT ACCTGAAAAT TGCTGAAGGA TGTAACCGTA CCTGCTCATT TTGCGCTATT CCGTTGATGC GCGGTGGTCA CGTATCCCGT CCTATCGAGC AACTGGTAGC AGAAGCGGAA AAACTGGTGA ATTCAGGTGT GAAGGAGATC ATGCTGATTG CACAGGAACT GACTTATTAC GGTCTGGATC TGTACAAGGA GCGTAGACTG GCCGACCTCT TAAGAGCGCT GGCACAGGTG AAAGGTCTGG AATGGATCCG TCTGCATTAT GCTTACCCGC ACAAATTCCC GATGGAAGTG CTGGACGTAA TGAATGAATT CCCGAATATT TGTAAGTATA TTGATATGCC GTTGCAACAC GCGGCCGATA ATATGCTCAA ATCCATGAAA CGTCAGATTA CACGCGTTGA AATGGAAGAT CTGATTACCG CTATCCGTGC AAAAGTACCC GGCATCTGTC TGCGTACCAC GCTGATCACC GGTTATCCGG GTGAGACGCT GGAAGACGTG GAAGAGACCA AACGCTTCCT TGAGAAGATG CGCTTGGACA GGGTAGGCGT ATTTACGTAT AGTCACGAGG AAGGTACCAG TGCTTACGAG CTGGAAGATA ATATCCCTGC GGAAGAAAAA GAACGCAGGG CACAGGATAT CATGGAAACG CAACAGGAAA TTTCCCTGGA GAAAAACCAG GAAAAAGTTG GCCAGGTATT CCGTGTAATC GTAGACAAAA AAGAATCAGG CCGTTACCTG GCTCGCACAG AATTCGATTC TGTGGAAGTA GATAATGAAG TAATCATTAA TACCAGCAAA CGCCTGAAAC CCGGAGAATT TGTTAATGTC AGGATCACCA AGGCATATGA TTATGACCTG GAAGGGGAAC TGGTGTAA
|
Protein sequence | MKTKTLKKDK VNIITLGCSK NMVDSEVLSG QLLANEIDVV HESAKKDHNI VVVNTCGFID KAKEESINTI LEQIELKNRG RLEKVYVTGC LSERYRGDLE SEIPGVDAWF GTMELPLILK KFDADYKAEL IGERLLATPT HYAYLKIAEG CNRTCSFCAI PLMRGGHVSR PIEQLVAEAE KLVNSGVKEI MLIAQELTYY GLDLYKERRL ADLLRALAQV KGLEWIRLHY AYPHKFPMEV LDVMNEFPNI CKYIDMPLQH AADNMLKSMK RQITRVEMED LITAIRAKVP GICLRTTLIT GYPGETLEDV EETKRFLEKM RLDRVGVFTY SHEEGTSAYE LEDNIPAEEK ERRAQDIMET QQEISLEKNQ EKVGQVFRVI VDKKESGRYL ARTEFDSVEV DNEVIINTSK RLKPGEFVNV RITKAYDYDL EGELV
|
| |