Gene Cpin_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3091 
Symbol 
ID8359256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3806712 
End bp3807587 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content47% 
IMG OID644965265 
Producthypothetical protein 
Protein accessionYP_003122761 
Protein GI256422108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.855499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0356785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTAA CCTCCATAGA TCGCGTAGAG AGTATTTCAG CTGAAGTATT CCGTAAGAAG 
TATTTCGAAC CACGGAAACC ATTAGTGATT ACCGGCCTGA GTAGAAACTG GCCGGCATAT
GAGAAATGGA CCTGGGATTA TTTCAAATCC ATCGTAGGGC AACAGACGGT AGGATTATAT
AATAATGAAC GTGCAGGGGC CAAAACCCTG GTAAATGGGG CAGATACCTA CATCAGCTTT
GGAGAATACC TGGATATGGT CAGAAAAGGA CCGGTACAAC TCCGGATATT CCTGTTTAAC
ATCTTCCAGC ATGCCCCTGA AATAGTGAAG GATTTCACAT GGCCGGATCA GCTGCTATCC
GGTTTTCTGA AGAAGTATCC CATGCTCTTT GTGGGCGGGG CGGGGTCGGT CGCCCATATG
CATTACGATA TTGATCTCTC TCATATTTTC CATACACAGT TTATCGGACG AAAAAGGGTG
TTATTGCTGG AAAACAGGCA ATCTCCGTAT ATATACCGGA TGCCTTTTAC GGTGGAGAGT
GCCGCCAGCT TTGTGAACTG GCATGATCAC CTGGATACCG AGCATTTCCC GGCACTGGAG
AAAGCCCAGG CGTATACAAC GGTGCTGGAG CATGGTGATA CACTGTTTAT GCCAGGTGGT
TACTGGCATC ATATGGAATA TATGGACAGC GGTTTTGCGA TGAGTCTGCG GGCATTGGAT
GAGACGTTGA CGGGAAAGCT GAATGGGTTG TATCATATCG TCGGACTCAG AAGTATGAAC
AACCTCCTGA TCAGACTGGC GCCGGAATGG TGGTATCATT ACAAAAGAAA AGTGGCCAGA
AGACGGGCAG AAAGGGTTTT GGAAGCTGCC GGATGA
 
Protein sequence
MHLTSIDRVE SISAEVFRKK YFEPRKPLVI TGLSRNWPAY EKWTWDYFKS IVGQQTVGLY 
NNERAGAKTL VNGADTYISF GEYLDMVRKG PVQLRIFLFN IFQHAPEIVK DFTWPDQLLS
GFLKKYPMLF VGGAGSVAHM HYDIDLSHIF HTQFIGRKRV LLLENRQSPY IYRMPFTVES
AASFVNWHDH LDTEHFPALE KAQAYTTVLE HGDTLFMPGG YWHHMEYMDS GFAMSLRALD
ETLTGKLNGL YHIVGLRSMN NLLIRLAPEW WYHYKRKVAR RRAERVLEAA G