| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3090 |
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| Symbol | |
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| ID | 8359255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3805531 |
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| End bp | 3806493 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965264 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_003122760 |
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| Protein GI | 256422107 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.417307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0202062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTTT TCAATAAGCT ATTTTCAAGG GAGAAGAAAG AAAGCCTGGA CCAGGGATTA
CAAAAGACGA AAGATAGTTT TCTTACCAAA ATAGGCCGTG CCATTGCGGG TAAAACCACC
GTTGATACAG AAGTACTGGA CAGCCTGGAA GAAGCACTGG TATCTGCTGA TGTTGGTGTG
GATACAACCG TACAGATCAT TGACCGAATA GAAAAACGCG TATCGAAAGA TAAGTACCTC
GGTACCGCAG AACTGAACAA GATCCTGCAG GAAGAAATTG CAGGTCTGCT CGTAGATGCT
CCGGATAGCG GATTCCGTGA CTTTGATGTG CCGGCTGATA AGAAGCCTTA TGTCATCATG
GTTGTCGGCG TAAACGGTGT TGGTAAAACG ACCACTATCG GTAAACTGGC TTATAACTTC
AAGAAAGCGG GTAAGTCTGT ATTACTCGGC GCTGCAGATA CGTTTAGAGC CGCAGCGGTT
GATCAGCTGA CCATCTGGAG TGACCGTGTA GGTGTACCGA TCGTAAAACA GCAGATGGGT
TCCGATCCGG GAGCTGTTGC CTTCGATACC GTACAAAGTG GCGCTGCAAA GGGATCTGAA
GTGATCATTA TCGATACCGC AGGTCGTCTG CACAACAAAG CCCATCTCAT GGATGAACTG
AGTAAGATCA AACGTGTGAT GAAGAAAGTG ATTCCGGATG CGCCGCATGA GGTGCTGCTG
GTATTAGATG GTTCTACCGG ACAGAATGCG CTGGAACAGG CCCGTCATTT TACAGCGGCT
ACCGAAGTAA CTGCACTGGC TATTACCAAA CTGGATGGTA CCGCTAAAGG TGGCGTCGTA
CTGGCAATCG CTAATCAGTT TAAAATACCG GTGAAGTATA TCGGTATCGG TGAGAAAATG
GAGGATCTGC AGGTATTCAG TAAAGAGGAA TTCGTAGACT CACTGTTTAG CATAAAAGAG
TAA
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| Protein sequence | MSFFNKLFSR EKKESLDQGL QKTKDSFLTK IGRAIAGKTT VDTEVLDSLE EALVSADVGV
DTTVQIIDRI EKRVSKDKYL GTAELNKILQ EEIAGLLVDA PDSGFRDFDV PADKKPYVIM
VVGVNGVGKT TTIGKLAYNF KKAGKSVLLG AADTFRAAAV DQLTIWSDRV GVPIVKQQMG
SDPGAVAFDT VQSGAAKGSE VIIIDTAGRL HNKAHLMDEL SKIKRVMKKV IPDAPHEVLL
VLDGSTGQNA LEQARHFTAA TEVTALAITK LDGTAKGGVV LAIANQFKIP VKYIGIGEKM
EDLQVFSKEE FVDSLFSIKE
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