Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3090 |
Symbol | |
ID | 8359255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3805531 |
End bp | 3806493 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965264 |
Product | signal recognition particle-docking protein FtsY |
Protein accession | YP_003122760 |
Protein GI | 256422107 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0552] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.417307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0202062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTTT TCAATAAGCT ATTTTCAAGG GAGAAGAAAG AAAGCCTGGA CCAGGGATTA CAAAAGACGA AAGATAGTTT TCTTACCAAA ATAGGCCGTG CCATTGCGGG TAAAACCACC GTTGATACAG AAGTACTGGA CAGCCTGGAA GAAGCACTGG TATCTGCTGA TGTTGGTGTG GATACAACCG TACAGATCAT TGACCGAATA GAAAAACGCG TATCGAAAGA TAAGTACCTC GGTACCGCAG AACTGAACAA GATCCTGCAG GAAGAAATTG CAGGTCTGCT CGTAGATGCT CCGGATAGCG GATTCCGTGA CTTTGATGTG CCGGCTGATA AGAAGCCTTA TGTCATCATG GTTGTCGGCG TAAACGGTGT TGGTAAAACG ACCACTATCG GTAAACTGGC TTATAACTTC AAGAAAGCGG GTAAGTCTGT ATTACTCGGC GCTGCAGATA CGTTTAGAGC CGCAGCGGTT GATCAGCTGA CCATCTGGAG TGACCGTGTA GGTGTACCGA TCGTAAAACA GCAGATGGGT TCCGATCCGG GAGCTGTTGC CTTCGATACC GTACAAAGTG GCGCTGCAAA GGGATCTGAA GTGATCATTA TCGATACCGC AGGTCGTCTG CACAACAAAG CCCATCTCAT GGATGAACTG AGTAAGATCA AACGTGTGAT GAAGAAAGTG ATTCCGGATG CGCCGCATGA GGTGCTGCTG GTATTAGATG GTTCTACCGG ACAGAATGCG CTGGAACAGG CCCGTCATTT TACAGCGGCT ACCGAAGTAA CTGCACTGGC TATTACCAAA CTGGATGGTA CCGCTAAAGG TGGCGTCGTA CTGGCAATCG CTAATCAGTT TAAAATACCG GTGAAGTATA TCGGTATCGG TGAGAAAATG GAGGATCTGC AGGTATTCAG TAAAGAGGAA TTCGTAGACT CACTGTTTAG CATAAAAGAG TAA
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Protein sequence | MSFFNKLFSR EKKESLDQGL QKTKDSFLTK IGRAIAGKTT VDTEVLDSLE EALVSADVGV DTTVQIIDRI EKRVSKDKYL GTAELNKILQ EEIAGLLVDA PDSGFRDFDV PADKKPYVIM VVGVNGVGKT TTIGKLAYNF KKAGKSVLLG AADTFRAAAV DQLTIWSDRV GVPIVKQQMG SDPGAVAFDT VQSGAAKGSE VIIIDTAGRL HNKAHLMDEL SKIKRVMKKV IPDAPHEVLL VLDGSTGQNA LEQARHFTAA TEVTALAITK LDGTAKGGVV LAIANQFKIP VKYIGIGEKM EDLQVFSKEE FVDSLFSIKE
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