Gene Cpin_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3088 
Symbol 
ID8359253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3804825 
End bp3805007 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content42% 
IMG OID644965262 
Productribosomal protein L33 
Protein accessionYP_003122758 
Protein GI256422105 
COG category 
COG ID 
TIGRFAM ID[TIGR01023] ribosomal protein L33, bacterial type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.174245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0267836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA AAGGTAACAG GGTGCAAGTG ATATTGGAAT GTACAGAGCA TAAGACTTCA 
GGTCAGCCAG GTACTTCCCG TTATATCAGC ACCAAGAATA AGAAGAACAC TCCAGAGCGT
CTGGAGCTGA AGAAGTACAA CCCAATCCTG AGAAAGGTAA CTGTACACAA AGAAATTAAG
TAA
 
Protein sequence
MAKKGNRVQV ILECTEHKTS GQPGTSRYIS TKNKKNTPER LELKKYNPIL RKVTVHKEIK