Gene Cpin_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3081 
Symbol 
ID8359246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3800139 
End bp3800762 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content48% 
IMG OID644965255 
Producthypothetical protein 
Protein accessionYP_003122751 
Protein GI256422098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.168814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0525898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTC TCACCGCTTT CTTCATCCTG TTTGCCAGCA TTTTATGCCT TGCCGGTCGC 
AATAGGGGTT ATGCCCAGTC GCGTCATGGA GCAGACAGTA TTGCAGTGGG GGCTATTATA
GTTGGTTCAG ACACAATTCC TTCCATCACT TTACACATCT TTGAGGTCGT GGACAAGCTG
CCTAAAAAGT TCCGGAAACA ACGCGAAGCA TGGACGCGTT TGCGGAATGC GGTGTACGTG
ACTTACCCTT ATGCGAAATC TGCGGCCAGA ATATTAAAAG ACGTTAATTC TCACCTGGCC
ACCTTGCACG ACAAAAAAGA CCGGAAGAAG TATCTCTCGG AAATCGAGAA GAAGATGAAA
GACCAGTTTG GCGACAAGCT GGAAAACCTG TCTGTTTACC AGGGAAAGGT GCTGATGAAA
CTGATTAACA GGGAGACCGG GCAGAACTGT TATGAGATTA TCAAGGAATT GAAAGGTGGT
TTCTCCGCCC GTATGTGGCA GACGGTAGCT TTTTTCTTTG GCGGTAACCT GAAGAGCGAT
TATGACACCC AGGAGGACAG GGATATTGAG GCCATTGTAC AGGAAATAGA GATGTACCGT
GGTTCCCGGG CATACAACTA CTAA
 
Protein sequence
MRRLTAFFIL FASILCLAGR NRGYAQSRHG ADSIAVGAII VGSDTIPSIT LHIFEVVDKL 
PKKFRKQREA WTRLRNAVYV TYPYAKSAAR ILKDVNSHLA TLHDKKDRKK YLSEIEKKMK
DQFGDKLENL SVYQGKVLMK LINRETGQNC YEIIKELKGG FSARMWQTVA FFFGGNLKSD
YDTQEDRDIE AIVQEIEMYR GSRAYNY