Gene Cpin_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3070 
Symbol 
ID8359235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3785872 
End bp3787158 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content51% 
IMG OID644965244 
ProductFolC bifunctional protein 
Protein accessionYP_003122740 
Protein GI256422087 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACC AGGAAACGGT TGACTACCTC TATCAGCAGC TACCCATGTT CACCCGGGTA 
GGCGCCAGTG CCTTTAAAAA GGACCTTCAC AATACGATCG AGCTTTGCAA ACAGCTCGGC
GATCCACAGC ATAAATTCAA ATCCATACAT GTAGCCGGCA CTAACGGAAA AGGCTCTACC
AGTCATATGC TGGCAGCTCT ATTCCAGCAA GCAGGTTACA AAACAGGATT GTACACCTCT
CCTCACCTGC TTGACTTCCG TGAGCGGATC CGTATCAACG GAGAAATGGT GTCTAAAGAA
TTCGTCGTTG CATTCGTCGA ACAAATGCAG CCCGCTATCG AAAGCCTTGA ACCTTCCTTC
TTTGAACTGA CCGTCGCCAT GGCCTTCCAG TACTTTGCAC TGGAACAGGT CGATATCGCC
ATCATCGAAG TTGGCCTCGG CGGCAGATTA GACAGCACCA ATATCATCAC CCCCGAACTT
TCCGTCATCA CCAATATCAG CTATGACCAC ATGCACATCC TCGGTAATAC CCTGCCGGAG
ATTGCATCGG AAAAAGCGGG CATTATCAAA GCAAATGTGC CGGTCGTTAT TGCACAGACG
CAGTCAGAAA TTGAGTCTGT CTTCATCGAT AAAGCCGCCT TCCTCGGTGC ACCGATTCAT
TTCGCTGATC AGGAATGGCT GATCCAGGAG ACGGAATTTG CCCAGGGACA GCTAAAATTG
GGCCTGCAGC ATACGCATAG CGGCGATATG AAAACCATCC GGACAGACCT GAGCGGCCAG
TACCAGATGA AGAATATTAT GGGCGTGCTT TCGGCGTGGA AAATACTACA GAAAGCGGGT
TGGGAACTGC CGGAGCAGAC AGTCCTGACG GCGCTGTCTC ATGTTAAAAA ACTGACCGGA
TTGCGGGGGC GTTGGGAGAC GGTTGCACAT GATCCGCTGA CGATCTTTGA TGTGGGGCAT
AATGAAGCAG GGATTACAGA GATTGTGCAG CAGCTGCAGC ATATGGTGTA TCGGCATTTG
CATATTGTGA CCGGGTTTGT GAAGGATAAA GAGGTGAATA AAGTGTTGCC GTTGTTCCCA
ACGGCGGCGA CGTATTATTT TTGTAAGGCG CAGTTGCCAA GGGCGATGGA TCAGCAGGAG
CTGGCGGAGC TGGCGCAGCA GCATGGCCTG AGAGGGCATG CGTATGAGAC GGTGCAGCAG
GCGTTTCAGA CGGCGAAGCA GCAGGCACAT AAAGATGATA TTGTGCTTGT GTGTGGTAGT
TTCTTTATCG TTGCAGAGGT GATGTAA
 
Protein sequence
MNYQETVDYL YQQLPMFTRV GASAFKKDLH NTIELCKQLG DPQHKFKSIH VAGTNGKGST 
SHMLAALFQQ AGYKTGLYTS PHLLDFRERI RINGEMVSKE FVVAFVEQMQ PAIESLEPSF
FELTVAMAFQ YFALEQVDIA IIEVGLGGRL DSTNIITPEL SVITNISYDH MHILGNTLPE
IASEKAGIIK ANVPVVIAQT QSEIESVFID KAAFLGAPIH FADQEWLIQE TEFAQGQLKL
GLQHTHSGDM KTIRTDLSGQ YQMKNIMGVL SAWKILQKAG WELPEQTVLT ALSHVKKLTG
LRGRWETVAH DPLTIFDVGH NEAGITEIVQ QLQHMVYRHL HIVTGFVKDK EVNKVLPLFP
TAATYYFCKA QLPRAMDQQE LAELAQQHGL RGHAYETVQQ AFQTAKQQAH KDDIVLVCGS
FFIVAEVM