Gene Cpin_3069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3069 
Symbol 
ID8359234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3784706 
End bp3785272 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content47% 
IMG OID644965243 
ProductNUDIX hydrolase 
Protein accessionYP_003122739 
Protein GI256422086 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAT TAGACTGGAA AACATTAAGT TCTGAATACC TTTTCAAAGA CAACTGGTTA 
ACAGCCCGTC GCGACAAATG TGAAACGCCT CAGGGAAAGA TTGTTGAACC GTATTATGTA
TTGGAATACA ATGACTGGGT AAACTGTGTC GCTGTAACTG ACGACGGCCG TATCATCATG
GTCCGCCAGT TCAGACAAGG CATCGGTAAA GCGGTCCTCG AAATTCCCGG CGGCACAATG
GACGATACAG ATCCATCCCC TGAATTTGCC ATGCGCCGTG AATTACTGGA AGAAACCGGC
TACGAATTTG ATAAACTCAT CAACCTCGGC GCCGTTGCAC CCAATCCTGC CTCCAGCAAC
AACCTGACAC ATATGTTCCT GGCCACCGGT GGTAAAAAGG TACAGGAACA GGATCTCGAC
GAAAACGAAG AAATCGAACT CGTCTTCATG GATCTCGAAG ACGTAGAAAA GCTGCTCCTC
GACAACCAGA TCCTGCAAAG TCTGCACGTC AGCTGTTTGT TCTATGCATT ACTGCGTCTG
AAGGAATTAA AGATCCAAAA GGCATAA
 
Protein sequence
MASLDWKTLS SEYLFKDNWL TARRDKCETP QGKIVEPYYV LEYNDWVNCV AVTDDGRIIM 
VRQFRQGIGK AVLEIPGGTM DDTDPSPEFA MRRELLEETG YEFDKLINLG AVAPNPASSN
NLTHMFLATG GKKVQEQDLD ENEEIELVFM DLEDVEKLLL DNQILQSLHV SCLFYALLRL
KELKIQKA