Gene Cpin_3068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3068 
Symbol 
ID8359233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3784145 
End bp3784687 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID644965242 
Productmetal-dependent hydrolase 
Protein accessionYP_003122738 
Protein GI256422085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG ACCTGGAGCA ACTCAAATAC CCTATCGGCA AATTCGAAGC GCCTGCTGAA 
ATCTCAGACC GCGTTTTGAA AGGTTACATT AGCGATATCA GATACTTACC ATCCCTGATA
GAGATCGTAG TACAAAGTCT GGACGAGGCG CAGTTAGCCA CTCCTTACAG ACCCGAAGGC
TGGGCGGTAT ACCAGGTTGT ACACCATCTG GTGGACAGTC ACACGCAGGC ACTCACCCGT
TTCAAGTGGG CGCTGACAGA AGACAATCCT GTCATCAAAG CCTATAATGA AAGTGCCTGG
GCGGAATTAC CGGATGTAAA GAAAACACCC ATCAATGTTT CGCTGACTTT ATTACATGCC
TTACATACCC GTTGGGTAAA CCTCATGGAT AACCTGACAC CGGAACAGTG GGCCCGCACA
TTTGTACATC CTGAAAGCGG TAAAACCATC GCTTTAAGGA CCCTGGCCGG CACCTATTCC
TGGCATGGCC GGCATCACCT GGCACAGGTA GAAAGATTAA AAGAGCGCAA TAACTGGCAC
TAA
 
Protein sequence
MDIDLEQLKY PIGKFEAPAE ISDRVLKGYI SDIRYLPSLI EIVVQSLDEA QLATPYRPEG 
WAVYQVVHHL VDSHTQALTR FKWALTEDNP VIKAYNESAW AELPDVKKTP INVSLTLLHA
LHTRWVNLMD NLTPEQWART FVHPESGKTI ALRTLAGTYS WHGRHHLAQV ERLKERNNWH