Gene Cpin_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3057 
Symbol 
ID8359222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3776676 
End bp3777236 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content44% 
IMG OID644965235 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003122731 
Protein GI256422078 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAA TAATGGCCTT GCAAAGGTGT TTACAGGACA TCGGTACATT TTCTCCTGCC 
GAACTGGAAC TCATTGCATC AAAATGCAGC CACCGGTATA TCGCTAAGAA TGATTATATC
CTGCAACAGG GAGCCATCTG CAATGCCATC AGCTTCCTGC TGACTGGGTC TTGTTATGAG
TCCTATACTG AAGATACAGA TGAAAATATC ATTGAGCTCT ATTGCGCCTA TGATTGCGTC
GTCAGTCCGT CCAGCTTCTT TTTGCAGCAA GCGGCTGAAC ATCCTATAAA AGCCTTTGCA
GATTGTGAAG TGTTGACATT AAGCATCCAT ACCCTACATC AGCTGATCGG TATTTCTCCG
GTATTTTTTC AGTTGGGTAA GATCTTACAA CCGGGTTGGT TTCGTGTAGG TTTTTATGAC
CAGCGAATGT CTCCGAAAGA GAAATATAAT CACCTGATGA CACACAAACC AACTATCATC
CGGACTTTTC CATTGAAATT CATTGCTTCC TATCTGAAGA TCACCCCCGA GACGCTTAGC
CGTATCCGGG CTGCGCAGTA A
 
Protein sequence
MDQIMALQRC LQDIGTFSPA ELELIASKCS HRYIAKNDYI LQQGAICNAI SFLLTGSCYE 
SYTEDTDENI IELYCAYDCV VSPSSFFLQQ AAEHPIKAFA DCEVLTLSIH TLHQLIGISP
VFFQLGKILQ PGWFRVGFYD QRMSPKEKYN HLMTHKPTII RTFPLKFIAS YLKITPETLS
RIRAAQ