Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3057 |
Symbol | |
ID | 8359222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3776676 |
End bp | 3777236 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644965235 |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003122731 |
Protein GI | 256422078 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAA TAATGGCCTT GCAAAGGTGT TTACAGGACA TCGGTACATT TTCTCCTGCC GAACTGGAAC TCATTGCATC AAAATGCAGC CACCGGTATA TCGCTAAGAA TGATTATATC CTGCAACAGG GAGCCATCTG CAATGCCATC AGCTTCCTGC TGACTGGGTC TTGTTATGAG TCCTATACTG AAGATACAGA TGAAAATATC ATTGAGCTCT ATTGCGCCTA TGATTGCGTC GTCAGTCCGT CCAGCTTCTT TTTGCAGCAA GCGGCTGAAC ATCCTATAAA AGCCTTTGCA GATTGTGAAG TGTTGACATT AAGCATCCAT ACCCTACATC AGCTGATCGG TATTTCTCCG GTATTTTTTC AGTTGGGTAA GATCTTACAA CCGGGTTGGT TTCGTGTAGG TTTTTATGAC CAGCGAATGT CTCCGAAAGA GAAATATAAT CACCTGATGA CACACAAACC AACTATCATC CGGACTTTTC CATTGAAATT CATTGCTTCC TATCTGAAGA TCACCCCCGA GACGCTTAGC CGTATCCGGG CTGCGCAGTA A
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Protein sequence | MDQIMALQRC LQDIGTFSPA ELELIASKCS HRYIAKNDYI LQQGAICNAI SFLLTGSCYE SYTEDTDENI IELYCAYDCV VSPSSFFLQQ AAEHPIKAFA DCEVLTLSIH TLHQLIGISP VFFQLGKILQ PGWFRVGFYD QRMSPKEKYN HLMTHKPTII RTFPLKFIAS YLKITPETLS RIRAAQ
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