Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3051 |
Symbol | |
ID | 8359216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3765960 |
End bp | 3766889 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965229 |
Product | ABC transporter related |
Protein accession | YP_003122725 |
Protein GI | 256422072 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACATA CTATCGTAAA AGTTGAAAAC TTATCTCACC GGTACGCGTC ACAGTGGGCG GTAAGAGATA TAAATTTTGA GATCAGCAGC CAGGGAGTAG TCGGACTATT AGGGTCTAAC GGAGCTGGTA AATCTACCAC AATGAATATC ATTTGTGGGG TGCTGAAGCA GTCTAAAGGG GAAGTATTTA TCAATGGCGT CAACCTGAAA GAAAATCCTG TAGCTGCTAA ACGCAATATT GGCTTTATGC CGCAGAAACT GCCCCTGTAT CTCGACTTTA CGGTAGAGGA ATACCTGACC TACTGTGCTG AACTGAGAAT GGTAGAAAAA ACACAGGTAA AGAAAGCGGT GGCCGATGCA TTGGAAAGAT GCGGCGTAGC GCATTTCAGA GAGCGTCTCT TACGTAACCT CTCCGGTGGT TATCAGCAAC GTGTGGGTAT CGCACAGGCG ATCGTACACA ACCCGAAGTT TGTCGTACTG GACGAACCTA CCAATGGTCT CGACCCGAAT CAGATAGTGG AAGTACGTAA CCTGATCAAA CAGATCGCAT TGGACCGTGC AGTTCTGCTT TCTACGCACA TTCTCACAGA GGTACAGGCT ACCTGCAGAG AGATCAAAAT GATCGAAGAA GGACAGATGG TATTCTCCGG TTCACTGGAA ATGTTTGATA ACTACATAGA ACCCAATACA CTTGTAGTCA CGCTGGATAC ACCTCCTGTA AGTGATGCAC TGATGAGCGT GGAAGGTATC AGATCCGTAG AGCAGATTGC TCCTTTCAGA TACCGTCTGG GTTATGATGG TGAAAAGAAA ACACCACAAC GCTTTGCTGC TGCCAGTGTG AGCCAGGATT GGGGACTGAT GGAACTGATC ATTGAAAAGA GCTCACTTGA TGAGGTATTT GCCAGACTGT CAAAGAAAAA CAATAAGTAA
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Protein sequence | MEHTIVKVEN LSHRYASQWA VRDINFEISS QGVVGLLGSN GAGKSTTMNI ICGVLKQSKG EVFINGVNLK ENPVAAKRNI GFMPQKLPLY LDFTVEEYLT YCAELRMVEK TQVKKAVADA LERCGVAHFR ERLLRNLSGG YQQRVGIAQA IVHNPKFVVL DEPTNGLDPN QIVEVRNLIK QIALDRAVLL STHILTEVQA TCREIKMIEE GQMVFSGSLE MFDNYIEPNT LVVTLDTPPV SDALMSVEGI RSVEQIAPFR YRLGYDGEKK TPQRFAAASV SQDWGLMELI IEKSSLDEVF ARLSKKNNK
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