| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3048 |
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| Symbol | |
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| ID | 8359213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3759768 |
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| End bp | 3763430 |
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| Gene Length | 3663 bp |
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| Protein Length | 1220 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644965226 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003122722 |
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| Protein GI | 256422069 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.134366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTTA TGCAAAAAAA ACGCTATTGG CCACCCGATC GCCGGGTTAC AAGCGCCAGC
CTAACCAAAA TCTTTCTGGC TATGAAACTG ACCGCTGTAT TACTAATTAC CGTCATCTTG
CAGGCCGCTG CCACAGGGCA TGCACAAACT ATCTCTATAT CAGGTAAAAC TATACCTTAC
AAACAAGTTT TTTCTGCCAT CAAGCAGCAA ACCGGATATG TTGTATTCAG CAATACAAAT
ACCATCAGTG AAACCGCAAC AGTATCAGTT TCCGCCAAGG ATATGCCCTT AACGGAATTT
CTGGATGAAA TGCTGAAGGA CCAGCCGGTC ACTTATCTTA TCAAGGACAA AACGATCGTT
CTGTCACGGA AAGCTGCGGA AGTATTACCT CCAACTACCA TCACCGGTAC GATCCGTACC
AGTACAGGGG AATTGTTATC GGGTGTATCC GTGAGAATTA AAAATACCGT CAATGGTACG
ATCACCAACA ACAGCGGTAC CTTTTACTTC AATCACCTTC CTGAAAATAC AGTGATCCAG
GTTTCCATGC TGGGATTCGA ATCGTTGGAA ATCGCGGTGC AGAAATCTGC CAACGGATAC
TCTGCTTATA CACTCAATAA AGCGCAGGCC AGCTCTTTGC TGGTGACAGA AGGTAATAAT
CTTGTATTGA ATATTACCCT GAACAGGAAG GATTACGAAA TGAATAATGT GGTGATTACC
GGTTATATGA ACGTCAACAA AGGTAACTAT GTGGGCGCTG TATATTCTGT AAAAGCCGAT
GAGATAAAAA TTGCGGGTGA AACCTCGATC GATCAGATGT TACAGGGGGT TGTTCCCGGT
ATGTCTGTAA TAACACAGAC GGGCCAGGTA GGCGGAAGTC CTAAGATCCG TATTCGTGGT
ACTTCAACTA TTCTGGGTAA TCAGGAACCA CTCTGGGTTG TAGATGGTAT CATTCAGCGT
GATCCGCTTC CTATTCCGAA TGGTAGTGGT TCGCTGGCAG GTGATGTTGC CGATCTCAGA
CTAATCGCAT CTAACGCTAT TGCCTGGCTG AACCCTAATG ATATTGAAAC CATCACTGTA
TTGAAAGATG CGTCTGCTAC CGCCATCTAT GGTTCTCAGG CAGCCAACGG TGTAATCGTT
CTTACTACCA AAAAAGCACG CCCTGGCCAG TTATCTGTTT CATATACTAA CAGTCTGTCT
GTGGGTCAGC GTCCTGATTA TGGTATGTAT GATCTGATGA ACTCCCAGGA GCTGATGCAG
TTCTCCAAAG AAGTATACGC CAACCGCGAC AGTTATACCA ATACTGTTTT GCCAATTGGT
TACGGTCAGC TTATCCAGCA ATTACAAAAT AAAGAAATAG ACTACCCTAC ATATCTGGCA
AGGTATAGAA AAATGGAAAA CCAGAATACA GACTGGTTTA AACTGCTTTT TCGTAATTCC
TTTAACCAGA ATCACAGTAT CAGCATCTCC GGAGGAACAG AGAAGATCAT GAACAGAACT
TCCTTCAATG TGCAACAGCA GAAAGGAGAA GCTAAAGGAA ATGATCTGAG TACTTTTTCC
GCTTCATCTA ATACGACCCT GAAATTTGGT AAGAAGATGA CTGTAAACTT CCTGCTGAAT
GGTACTGTAC GTAAGACTGA TGGTTTCGCA TATGGTGTGA ATCCATTCGA TTATGCCTAT
CAGACTGCCA GGACCATCCC GCTGTATAAC GATGACGGAA CATTTTTCTT TCATGAGAAG
GTAAGCCAGA TCTCCAGTAC TTCCTATCTC AATAAATTTT CTTACCTGTA CAATATTCAG
AACGAAATAG ACAATACGGG TAACAGAAAT AATACGACTA CACTGGGATC TACTATCGAT
GTACGTTATG AGTTGGCAAA AGGGCTGGAA TACCAGGGTC TGCTTTCTTA TAGTTCAGCC
ACCTCCAACA TCAAATCCTA TGCGACCGAA CTCTCTTACT TTGCTACGCA ATACAGAGGG
TATGAATTTG GTACGGTGTC TTCCAATAGC CCTGAAGAAT TGGCCAGCCG TCTGCCTTTC
GGAGGACTGG CACAGCTGGA AAGTGCATCC AACAGATCCT ATACCGTAAG GAATGCCCTT
ATTTACAACC ACTCATTTGC ACAAAAGCAT AATATGACCT TACAGGGTGG TATCGAAGCA
AGATCTTCTC TTTTGGAAGG AAGCACCAAT ACCCGCTATG GTTATCTGCG CTACCGCGGA
GAAAGCTTTG CACCGGTGCC TTTGATGCCG GCAATGCTGA CAAATTTTTC CGCGCCAAAC
CTGCATGAGG ACATGCGACT GAATTCCAGG ATCGTGAACC AGGAAAGCAA TTTCCTGAGC
GAATATTTCT CTGCTGTGTA TGCATATGAC GCCCGTTACA TTTTCAACTT TAACGCGCGA
CTGGATGCCT CTAATCGTTT TGGCCAGGAT AAAAACAAAC GTTTTCAACC TACCTGGTCA
CTGGGTGGCA GATGGCGCCT TGCAAATGAA AAATTCCTTA ACAACAACAA CTGGCTGAAT
GCGCTGGATC TGTCTGCCAC TTATGGTTAT CAGGGTAACG CAGTGGAAGC CGTGTCTCCA
TACCTTATCG CCACAGACGG AGGGCTGAAT GACCAGTTCA AACAATACAC CCTTAATATT
AAGTCTTTGC CCTACCCGGA TTTAGGCTGG GAAAAAACCA AGACCTGGAA CCTTGGGCTG
GATGTTTCTG TATGGAATGG CCGATTCAAT GCGACAGCGA ATTACTACAG GAAATCAAGT
AATGTGCTGG CTTCCCGCCA GATACCTGTT GAAAACGGTA TGGGTTCTGC AACCGTATTT
GGCTCTCAGA TAGAAAATGT GGGGTATGAC CTGATTATAA GTGTTATCCC TGTTAAAACA
AAGGACTTCA GCTGGCAGAT TTCTGTGAAT ACTGGTCTGG CAAGAAACAA GGTGAAAGAG
AATGAAAGAG TCAACCTGCT AGCCGACTAT CTGGGCGGTC AGGCGATTGT GAATGGCGAG
GCATACTCTA CCTTCTATTC TTATTCCTAT GCGGGACTTA ACCACAACAC CGGTATCCCT
ATGTTTAATA ATCTGGATAT CAAGCCTACT TCCAATGATC TTGATTTCCT CGTTAAATCA
GGAAAACTGG AACCCGATTT TTCAGGTGGT GCCAATACCA TGTTCAGGTA TAAGAATATA
TCCTTCAGTG CGCAGTTTGC AGTGGCGTTT GGCGCCAGCA AACGTCTGCC TTCATTTTAT
AATGCAAGTG GCGCCCCAAC TCCTGAACAG AATGTGCCAC GTATCCTGAA AGAACGCTGG
CAACATCCGG GAGATGAATT AAATACCAAT GTGCCGGTAA TCCCTCCAGG TAACCCCCGT
TACTATGAGT TGACTTTACC GCAGTTAAAT AAATCAACAA CACTGACACC ATATACCTTG
TATAATGCAT CTGATTATAT GGTGGGAAAT GCTGATTTTA TCCGTTGTCG TCAGATGTCA
CTGAATTATG AATTCACACA GTCGATACTC GAAAGAATCC ATATTAAACG TCTGAGCACA
TCATTCAGTT TAACAAACCC TTTCCTGATC ACATTTGATA AGAAATGGAG AGGTTATGAT
CCGGAAACAG TGGGCTGGCC GGCACGCAGA CTGGCGTCGC TTTCATTTAA CATGACACTC
TAA
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| Protein sequence | MQFMQKKRYW PPDRRVTSAS LTKIFLAMKL TAVLLITVIL QAAATGHAQT ISISGKTIPY
KQVFSAIKQQ TGYVVFSNTN TISETATVSV SAKDMPLTEF LDEMLKDQPV TYLIKDKTIV
LSRKAAEVLP PTTITGTIRT STGELLSGVS VRIKNTVNGT ITNNSGTFYF NHLPENTVIQ
VSMLGFESLE IAVQKSANGY SAYTLNKAQA SSLLVTEGNN LVLNITLNRK DYEMNNVVIT
GYMNVNKGNY VGAVYSVKAD EIKIAGETSI DQMLQGVVPG MSVITQTGQV GGSPKIRIRG
TSTILGNQEP LWVVDGIIQR DPLPIPNGSG SLAGDVADLR LIASNAIAWL NPNDIETITV
LKDASATAIY GSQAANGVIV LTTKKARPGQ LSVSYTNSLS VGQRPDYGMY DLMNSQELMQ
FSKEVYANRD SYTNTVLPIG YGQLIQQLQN KEIDYPTYLA RYRKMENQNT DWFKLLFRNS
FNQNHSISIS GGTEKIMNRT SFNVQQQKGE AKGNDLSTFS ASSNTTLKFG KKMTVNFLLN
GTVRKTDGFA YGVNPFDYAY QTARTIPLYN DDGTFFFHEK VSQISSTSYL NKFSYLYNIQ
NEIDNTGNRN NTTTLGSTID VRYELAKGLE YQGLLSYSSA TSNIKSYATE LSYFATQYRG
YEFGTVSSNS PEELASRLPF GGLAQLESAS NRSYTVRNAL IYNHSFAQKH NMTLQGGIEA
RSSLLEGSTN TRYGYLRYRG ESFAPVPLMP AMLTNFSAPN LHEDMRLNSR IVNQESNFLS
EYFSAVYAYD ARYIFNFNAR LDASNRFGQD KNKRFQPTWS LGGRWRLANE KFLNNNNWLN
ALDLSATYGY QGNAVEAVSP YLIATDGGLN DQFKQYTLNI KSLPYPDLGW EKTKTWNLGL
DVSVWNGRFN ATANYYRKSS NVLASRQIPV ENGMGSATVF GSQIENVGYD LIISVIPVKT
KDFSWQISVN TGLARNKVKE NERVNLLADY LGGQAIVNGE AYSTFYSYSY AGLNHNTGIP
MFNNLDIKPT SNDLDFLVKS GKLEPDFSGG ANTMFRYKNI SFSAQFAVAF GASKRLPSFY
NASGAPTPEQ NVPRILKERW QHPGDELNTN VPVIPPGNPR YYELTLPQLN KSTTLTPYTL
YNASDYMVGN ADFIRCRQMS LNYEFTQSIL ERIHIKRLST SFSLTNPFLI TFDKKWRGYD
PETVGWPARR LASLSFNMTL
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