| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3046 |
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| Symbol | |
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| ID | 8359211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3757728 |
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| End bp | 3758330 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644965224 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122720 |
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| Protein GI | 256422067 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCAGCCA GAACAGCATA TGAAGAAATT GAGCTGATTT CCGCCTTTCA GCGAGGAGAC
AGAAAAGCTT TGCACCAGGT ATATACGCTC TATCAACAGT CACTTTGTTT TTTTACAGAG
CAGCTGATCG GGGATACTAT GGCGGCAGAG GACATTGTTT CAGAATGTTT TATCAACGCT
TTTCAGCGAA AAGAGGATTT TCCTTCCTTA GGACAATTGA AGTCTTTCCT GTTCACCGCA
GCAAAAAATG CGGCACTTAA TTATATAAAG GCGCAAAAAC GCCATGATAA TATTCATAAT
TCCATAGAAA GGGGGGCCGA ACGTTTCTCA ATAGATGTAG AGAATGCATA TATAAAAACA
GAAGTCTTAC ATATTATATC AGGGGAAATA GAAAAATTAC CACCACAATG CCGGCAGGTT
GTACACCTGG CCATTATAGA AGGGAAAAGC GCTCCCGAAA TCGCCGCTGA ATTAGATATG
GCTTATCAGA CAGTGCTGAA TCAAAAAGCC AAAGGGGTAG CATTACTGCG TACCGCCATC
CTTAAAAATA AGTTACTTTC CTTGCCCATG CTCGTTTTAG CGTTGAATAT TTTACACCGG
TAA
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| Protein sequence | MSARTAYEEI ELISAFQRGD RKALHQVYTL YQQSLCFFTE QLIGDTMAAE DIVSECFINA
FQRKEDFPSL GQLKSFLFTA AKNAALNYIK AQKRHDNIHN SIERGAERFS IDVENAYIKT
EVLHIISGEI EKLPPQCRQV VHLAIIEGKS APEIAAELDM AYQTVLNQKA KGVALLRTAI
LKNKLLSLPM LVLALNILHR
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