| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3021 |
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| Symbol | |
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| ID | 8359185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3741232 |
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| End bp | 3742350 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644965201 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003122698 |
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| Protein GI | 256422045 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTG AGACAATATG CGCAAAACCT AATTTTGTTG TTATGAAAGA AGGGGTTCTT
GTAGTGAAAA GAAAGACAGA GAAAAAGAAG GTTGTTATTG TGGCTATGAC TGGCCGTATG
CTAATGGACT TCGTTGGCCC GGCAGACGTA TTTACAACTG CCAATATATT TTTAAAACAC
TCCGATATCC ATGAAGGATA TGATGTTAGG ATCGCTTCTC CTACAGCTGA AAAAAAAGTA
GTTACAGGAG CAGGTGCAGA TATTTTATGC CAGGTTAGTG CAATTGACAT CAGGTCGCGT
ATCGATACGC TGATTATATC CAATTATGAC TCCCATGAAT CTTTCACCGA ATTGTTCGAA
CCTTTCTATA GATGGCTTTC AAAAAGAACA CCCAATAATA CAAGGAGGAT CGCTTCTGTG
TGTGCGGGCG CATTTGCTTT AGCGCAGGCA GGTCTTATCA ACAATCATAA AGTAACAACA
CACTGGGGAC TTAACGAAAA ACTACAAAAA ACCTATCCAC AGCTCAGCGT AGACACGAAT
CCCTTCTTTG TCAAGGATGG ACATATCTAT ACATCAGGCG GGGTATCTTC AGGCATCGAC
CTGGCTTTGG CTATGGTCGA GGAAGATTTT GGTAAGGAAA TAGCTATCCA GGTAGCGAGG
GAACTGGTAG TCTATTTATA TAGACCAGGT TATCAAAGCC AGTTTGCTAA TCTGTTACCG
TCCACGGAAA GTACAGGTCT TAGCCAGAAA TTACGAACCT GGGTGCTGGA ACATTTGAAT
GAACAATTAG ATGTGAGAAG GATTGCAGAT CACCTGAATA TGAGCCCCCG TAATTTTACC
AGGGTATTCA ATAAGCAGAC AGGTTCTTCC CCGGCAAAAT TTGTAGAGAA AGTGCGTGTC
GAGCAGGCCA GGAGATTATT GGAGGATACT GACAACTCAC TGGAAAGTAT TGCAGAAATG
TGCGGATTCG GTGGTCTTAG TTCTCTGCGT CGAACATTTT TAAGGCTGCT AATGACCACT
CCGTCCGATT ACCGACGGGT ATTCAGGAAA GCACTGCGAG ATGCCGGCTT AGGTGAACAT
TACCCATTGA ATATTATCAA CCAGCATGAG ATGGACTGA
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| Protein sequence | MSFETICAKP NFVVMKEGVL VVKRKTEKKK VVIVAMTGRM LMDFVGPADV FTTANIFLKH
SDIHEGYDVR IASPTAEKKV VTGAGADILC QVSAIDIRSR IDTLIISNYD SHESFTELFE
PFYRWLSKRT PNNTRRIASV CAGAFALAQA GLINNHKVTT HWGLNEKLQK TYPQLSVDTN
PFFVKDGHIY TSGGVSSGID LALAMVEEDF GKEIAIQVAR ELVVYLYRPG YQSQFANLLP
STESTGLSQK LRTWVLEHLN EQLDVRRIAD HLNMSPRNFT RVFNKQTGSS PAKFVEKVRV
EQARRLLEDT DNSLESIAEM CGFGGLSSLR RTFLRLLMTT PSDYRRVFRK ALRDAGLGEH
YPLNIINQHE MD
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