| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3019 |
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| Symbol | |
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| ID | 8359183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3739258 |
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| End bp | 3740394 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965199 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003122696 |
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| Protein GI | 256422043 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.809394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAA ATCTGATATA TGGCATGTTA GCTAATGCTA TCATGCTTTC GGGCTGCTCA
TCAGGCGGTA CACAATCGCC AACCGCAACA ACACCAACAG TACCGGTGGC CACCGTTAAT
GCAGGTGACG CCGTTGTCTA TACGGAATAT CCGGCGAAGA TTGAAGGTCA GAACGACATT
GAGATCAGAA CACAAGTTGC GGGAATACTG GAAAAAATCT ACGTTTCCGA AGGGGCATAT
GTAGAAAAAG GCGCTCCCTT GTTTCAAATT GACGCGCGAC CATATCGCGA AGCATACAAC
AATGCCGAGG GAGAATTACT CGCTGTCAAA GCAGGCGTAG TCACTGCAAA ACTAGAGGTT
GATAAGCTAA CACCACTGGT TCAAAGCAAG GTGGTATCTG CTTACCAGTT AAAAACCGCA
CAGGCTGCCT ATGAAGCTGC CCTGGCGAGA GAAAAACAAG CAGCAGCCAA AGTCGGAAAT
GCGAAGATTA CCTTGGGTTT CGCGACCATC ACGGCACCGG TAAGTGGATA TATCGGCAGA
CTTTTCAAGA AAACAGGAAG TCTCCTTGCG CCTTCGGACA CTCAGCCCTT ATCCTATCTT
TCTGATAACC GGGAAGTACA TGCCTATTTT TCTATTGGAG AAGCTGATTT TGTCACGTTC
AAAAATGAGT TAAAGGGCGC TTCAATTGAC GAAAAATTAA AGCATGCGGC GGCTGTAAAT
ATGTTGCTTT CCGGAGGAAC AGCGTATTCG CAAACGGGCG TATTGGATAT GGTTGACGCG
GCTTTTGATA AAAATACCGG AGCAATCACT TTGCGCGCGA CATTCCCCAA TAAAGGAGGT
TTACTTCGTT CCGGTAATTC AGCCCGGATA AAATTGGCAC TTAAACAATC CGGAGTGATC
CGCATCCCCC AATCTGCCAC TTTCGAAATG CAGGATAAAA CATTTGCGTT TATCGTTGAC
CAAAATAGTA AAGCACGACA GGCGGCACTG ACCATATCCG GATCAACGGG AAATACCTAT
TATATCTGCG GTGGATTAAA GGATGGCGAC CGGCTTGTTC TAAAGGGGTT GGAGTCTCTT
AAAGATGGTA CAGTCGTAAA ACCTGAAAGA TCGAACGAAA AATTGGCCAG CAATTAA
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| Protein sequence | MNRNLIYGML ANAIMLSGCS SGGTQSPTAT TPTVPVATVN AGDAVVYTEY PAKIEGQNDI
EIRTQVAGIL EKIYVSEGAY VEKGAPLFQI DARPYREAYN NAEGELLAVK AGVVTAKLEV
DKLTPLVQSK VVSAYQLKTA QAAYEAALAR EKQAAAKVGN AKITLGFATI TAPVSGYIGR
LFKKTGSLLA PSDTQPLSYL SDNREVHAYF SIGEADFVTF KNELKGASID EKLKHAAAVN
MLLSGGTAYS QTGVLDMVDA AFDKNTGAIT LRATFPNKGG LLRSGNSARI KLALKQSGVI
RIPQSATFEM QDKTFAFIVD QNSKARQAAL TISGSTGNTY YICGGLKDGD RLVLKGLESL
KDGTVVKPER SNEKLASN
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