Gene Cpin_2999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2999 
Symbol 
ID8359162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3705450 
End bp3707873 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content48% 
IMG OID644965178 
Productpeptidase S45 penicillin amidase 
Protein accessionYP_003122676 
Protein GI256422023 
COG category[R] General function prediction only 
COG ID[COG2366] Protein related to penicillin acylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTG TTCCCTTTAC CGTTTCAGCG GTGATAACCA TTGCACTGAT AGTTTGCCTT 
GACCGATCCT GGGGCTCACT TCCACCACTC GGACGTTTGT TAAGTCCGCA GGAAGGCTTT
TGGCAAAACG CGACCTCTAT CAGTAAAGAT TATAATGAAG ATTTACAGGT GCCTGGTCTG
AAGGGAAAGG TGGAAGTCTG GCTGGACGAC AGGATGGTGC CTCACATCTT CGCAGAAAAT
ACTACTGACG CTTACTACGT ACAGGGATAT ATGCATGCGC GTGACAGGTT ATGGCAGATG
GAGTTGCAAT CTTTTGCAGC AGCAGGTCGC CTGTCAGAGA TCCTGGGCGC AAAAATGATC
CCTTATGATC GTCAGCAGCG CCGTAACGGG ATGCTGTATG GCGCCGAACA GGCCCTGAAG
GCAATGGAGG CAGATTCAGT GGCTGGTCCG GCAATCAATG CCTATTCCGA TGGGATCAAT
GCTTACATTA ATACCCTCAC TAATGCGACA CTTCCTTTAG AATACAAATT GCTGAATTAT
AAACCGGAGA AATGGACGCC GCTGAATTCA GCACTGTTAC TCAAAATGAT GGCGGCAGAT
CTGGCCGGCG GTGTGAATGA CCTGGTATAT ACCAATGCCC GCCGCCTCTT CAGTAAAGCA
GACTTCGACA ATCTGTACCC TGATTTCGGC GATAGCATCG ATCCGATCAT TCCCCGTGGC
ACACAATATC CGACGCCGAC AGTAAAGGCT ACACTACCCG TGGATAGCAT CCTGAATGCC
GCCGGTCTTG CGCTGCACTT CAAAGAGGAG AGACCTGATC CCGACAATGG TAGTAACAAC
TGGGCAGTGG CAGGTTCGAA AACACGTGCC GGTGCGCCGA TCCTTTGTAA TGACCCTCAC
CTGGGCCTGA GTTTACCTTC CCTTTGGTAT GAAACGCAGA TCCATACACC TGAGATGAAC
GTTTATGGCG CTACATTACC AGGTGCACCT GGTGTGATCA TCGGCTTCAA CGATCATATT
GCCTGGGGCG TGACCAACGC AGCTGAGGAT GTAAAAGATT ATTACCTGAT GCAGTTCCGT
AACGGGAAGC AGCAATATCT CTTCAACGGG ACTTACCGCG ATGCAGAAAT GCGTATTGAA
AAGATCAACG TCAAAGGAGC GGCGCCTTAT TACGATACTG TTGCCTATAC TGTTTGGGGC
CCTGTGGTAT ACGACAATGT TTTCCCGGAC ACGGCTACCA ATCATCAGTT CCTTGCCATG
CGCTGGAAAG CACTTGATCC TTCTGCTGAA ATCAGGACCT TCCTGGAACT TAACAAAGCA
CATAACTACA ATGATTATCT CGCCGCTTTA AAATATTATG CTTGTCCTGC ACAGAACTTC
GCCTTTGCTG CTAAAACCGG TGAAATAGCA CTCTGGCATA ACGGACAGTT CCCTTTACGT
TGGAAAGATC AGGGAAAATG GATCATGCCG GGCAGTGATA GCTCCTTTGC ATGGCAGGGA
TATGTACCGC AAGGTGAGAA CCCACATATT TACAATCCGG CACGTGGTTT TGTAAGCTCT
GCCAATCAGC ATCCGACAGA CAGCACCTAC CCATATCGCT ATGTAGCAGA CTTCGACCTG
TTCCGTGGCA AACGCATCAA TGAAGTACTG GCCGCTGATA GCCAGATCAC GATACAGGAC
ATGATGGATC TGCAAAACGA TAACCTGAAT CCTTTTGCCC GGGCCGCTCT GCCTTTGATA
CGCAAACATC TGCCGGTATC ACTGCTGACT GCCGATCAGA AGAATTACTG GCAGATCCTT
GATAAATGGG ATTTACAAAG TGGACCTGAC AGCAAGGCAG CGACTATCTT TAATATCTTC
TGGGATGAAT TGCAGTCGTC TGTTTGGGAC GATGACATAC TTGTAGACAA AACACCTCTA
CAACAGCCCT GGGAAAAAAC AACCTTGTTA TGGTTGTTGC GGGACTCTTC CATGAAGTTC
ATCGATAATA AACATACACC AGAAAAAGAG ACACTCTCAC AAATTGTTTT AGGCGCGTTC
ACAATAGCGG TAGACAGTGC CAAAACATTA GATGCGCAAA AGAAACTGGA GTTCGGCCGT
TTCCGTGGTA CGAATATCCG TCACCTGACA CGATCTATTA TACCTTTCAG CGCAATGAAT
CTCCGTACGG GCGGTGGCCG GCATATTGTA AATGCGACAA AACAATTGCA TGGTCCTTCA
TGGAAAATGG TAGTACAGCT GAGCGCGAAG ACAGAAGCTT ATGGTATCTA TCCCGGAGGA
CAGAGCGGTA ATCCGGGTAG TCCGTATTAT GACAATGCAG TGCAGGATTG GGTACAAGGA
AAATACTATT TACTGCATGT GTTTGATCTG AAAGAGAACG ATGATCCTGC AGTGAAGTTT
AAGATACATT TTAGCAAGGG ATAA
 
Protein sequence
MRFVPFTVSA VITIALIVCL DRSWGSLPPL GRLLSPQEGF WQNATSISKD YNEDLQVPGL 
KGKVEVWLDD RMVPHIFAEN TTDAYYVQGY MHARDRLWQM ELQSFAAAGR LSEILGAKMI
PYDRQQRRNG MLYGAEQALK AMEADSVAGP AINAYSDGIN AYINTLTNAT LPLEYKLLNY
KPEKWTPLNS ALLLKMMAAD LAGGVNDLVY TNARRLFSKA DFDNLYPDFG DSIDPIIPRG
TQYPTPTVKA TLPVDSILNA AGLALHFKEE RPDPDNGSNN WAVAGSKTRA GAPILCNDPH
LGLSLPSLWY ETQIHTPEMN VYGATLPGAP GVIIGFNDHI AWGVTNAAED VKDYYLMQFR
NGKQQYLFNG TYRDAEMRIE KINVKGAAPY YDTVAYTVWG PVVYDNVFPD TATNHQFLAM
RWKALDPSAE IRTFLELNKA HNYNDYLAAL KYYACPAQNF AFAAKTGEIA LWHNGQFPLR
WKDQGKWIMP GSDSSFAWQG YVPQGENPHI YNPARGFVSS ANQHPTDSTY PYRYVADFDL
FRGKRINEVL AADSQITIQD MMDLQNDNLN PFARAALPLI RKHLPVSLLT ADQKNYWQIL
DKWDLQSGPD SKAATIFNIF WDELQSSVWD DDILVDKTPL QQPWEKTTLL WLLRDSSMKF
IDNKHTPEKE TLSQIVLGAF TIAVDSAKTL DAQKKLEFGR FRGTNIRHLT RSIIPFSAMN
LRTGGGRHIV NATKQLHGPS WKMVVQLSAK TEAYGIYPGG QSGNPGSPYY DNAVQDWVQG
KYYLLHVFDL KENDDPAVKF KIHFSKG