Gene Cpin_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2973 
Symbol 
ID8359136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3668039 
End bp3668569 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID644965153 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003122651 
Protein GI256421998 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0472391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTAG CAACGGAAAG ACTGGCAATA AGACCGATCC AGGCCGGTGA TAAAGATCAG 
CTCTTCGCAT ACAGATCGGA TGCGGAAACC AACCAGTTCC AGGGCTGGAT ACCTGCCTCT
TTAGAAGACG TAGAACGCTT TATTGACAAA CAACCAACGG TGTTTAACAC CCCGGATACC
TGGTTCCAGC TGGTGATAGT AGAAAAGACG AAAGACCTCA TTATCGGTGA TATTGGTATT
CACTTTATAG GCAGTGAACA ATTCGAATTT GGCATCACGA TCCATAAACA ATATCATCAA
CAGGGATATG CGGTTGAAGC ACTCAGGGCT GTGATCACCC ATATGTTCAA TGATCTGCAC
AAACACCGGG CAACTGCCTC TATCGACCCG GAAAATTATC ATTCCATACG GCTGGTGGAA
CGGCTTGGGC TCAGAAAAGA AGCACATTTT AAAGAAAGTC TCTTCTTCAA AGGCCGATGG
GTAGATGATC TGGTCTATGC TGTGCTTAAA AAAGAATGGA TCTCTAATTA A
 
Protein sequence
MHVATERLAI RPIQAGDKDQ LFAYRSDAET NQFQGWIPAS LEDVERFIDK QPTVFNTPDT 
WFQLVIVEKT KDLIIGDIGI HFIGSEQFEF GITIHKQYHQ QGYAVEALRA VITHMFNDLH
KHRATASIDP ENYHSIRLVE RLGLRKEAHF KESLFFKGRW VDDLVYAVLK KEWISN