| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2972 |
|---|
| Symbol | |
|---|
| ID | 8359135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 3667583 |
|---|
| End bp | 3668029 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644965152 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_003122650 |
|---|
| Protein GI | 256421997 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0451042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTA CAATAGCACC TGTCAGCAAA GCTGACTATA TGGAAATTAT CACTGTCTGG
GAGAAGTCTG TACGCGCAAC ACATCATTTT CTACAGGAAG AAGATATTCA ATACTACAAA
CCACTTATTT TAAATACCTA CCTGGATGCC GTGGAACTAC GTTGTGCGAG AAATGCTGCC
GGTATTGCAG GTTTTGTTGG CGTTGCGGAG CATAATATAG AAATGTTATT TATTGATCCG
GAGTACCGGG GTAAAGGTGT AGGTAAACAA TTACTGGATT ATTCGATCAA AATGCTACAT
GCAGACAAAG TAGACGTAAA TGAGCAGAAT GAACAGGCAG TTGGTTTTTA TCTGCATTGT
GGCTTTGAGA TCATTGGCCG GTCGGCACTC GACTCAAGCG GGAAACCTTT TCCGATCCTG
CATATGCAAT TGCATCGGCA AGATTAA
|
|---|
| Protein sequence | MEFTIAPVSK ADYMEIITVW EKSVRATHHF LQEEDIQYYK PLILNTYLDA VELRCARNAA
GIAGFVGVAE HNIEMLFIDP EYRGKGVGKQ LLDYSIKMLH ADKVDVNEQN EQAVGFYLHC
GFEIIGRSAL DSSGKPFPIL HMQLHRQD
|
|---|
| |