| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2971 |
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| Symbol | |
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| ID | 8359134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3664975 |
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| End bp | 3667542 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644965151 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003122649 |
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| Protein GI | 256421996 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0529993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCAC ACTTTTTCGT GCCCTGCCTC AAAGGGAGCA CGATCCAAAG AAAAAATACC
ATTGTAAGAC ACCTGTTTAC GTTGTTATTT AGCGTTATCC TTTGTTCCAC GCAGGTTTAC
AGTCAGGTCA TCAATCCCCG TACACTTCCA CAGGAATGGG GCGAATACGG TATAGGAGAT
CCCTATATCC TTAAATTCAG AGGTAAGTTC TATCTGTATT GCAGCACCCG CGACGACCAG
AGCGGGGTTA AATGCTGGAG CAGCTGGGAC CTGGCCAACT GGACCTACGA AGGTCTTTGT
GTAGACAATA CAGTTACCAT CACCAAAGGC GCCTATGCAC CCGAAGTGAT CTACTGGAAC
GGTACCTTCT ACATGTATAC ATCTCCGGCA GGTAATGGAC ATTATATTTT GTCTAGCGGC
AGTCCGACGG GACCTTTCAC CGTGCAGACC GGCAACATAG GCCATACCAT TGACGGCTCT
GTATTCATTG ACGACAACGC ACAGATGTAC TTCACCTATG CCGGGGGCTC GGGCATACAG
GCGGCTGCCA TGAGTGGTCC TTTAGCGATC ACCGGTGCAG GCAGTACCTT GAGTGGTACC
TCGCTGAACG GCTGGACAGA AGGCTCCACG CTTTTTAAGC GCAATGGTAT TTATTACATG
ACCTATACGG GTAATCACGT CTTCAGCAGG GGCTACCGGG TGCATTATGC AACAGCTACC
ACGCCATTAG GAGCCTATAC AGCAGGGACG AACAATCCTA TTGTCCTGAA TACGGAAGGG
AGCTTCTTCG GACTGGGACA CAGCGGTTCC GTGATTGGTC CGGATCTGGA TACCTGGTTT
ATTGCCTATC ACAACCTATT AGGTCAAAGT AGTATCGTCG GTCCTAACAG GAAGCTGAAT
ATCGATCCGA TGGGCTTTAA CGGCGACAAA CTGCTGGTAT ATGGTCCTAC TTACTGGACC
CAACCATCGC CGGCATTACC GACCTTTTAT GACCGTTTTG ACCGTACTGC CATTGGCAGT
AACTGGACAA ACATTAACGG CGGTAACTGG GGAATATTCA ACCAGGAGCT GATGTGGCAG
GATAACAAGA CGACGACGCA ATGGTATCGC CAAGTTACGA CCGCTACCTC AGCAGCCGAT
TACACGGCTG AATTCAATAT GAAGGAAATG AGCAGGGGAG GGAATGGCGC ACGCTTTGGC
GCCGTGTTTT CTTATGTAGA TGAAAATACG TTTGGTTCCG CACTGCTAAG CAGTTTTAAT
AACACACTGG AAACAGATGT CAAAGTGAAT GGCGTCTCTG TCGGCGTAAG CGCTATTCCG
CTGCCAGCTG GCTGGGACTA TCAGAAATGG CATGTCATAC GCGTCGAAAA ACAGGGCACT
ACCTTCCGCA TTTACCTGGA TGGTATGCTG AAATCAACCC GTACGGCTAA TATTACTGCC
GGCGGTAAGA TTGGGGTAGC CACGTATAAC GATCATGCCG ACTTCGGATT TACCGCTTTC
AGCAACCGGG TGAATGGCAG CGGCGTATTC GGTTTTTATA AACCGGTACC CGGCACTATC
CCGGCGGTAC ATTATAACGA AGGAGGAGAA GGAGTGGGTT ATCACGACCT GACGATCGAA
AATACCGGTG GCAAATACCG GACAGACAGG GTAGATATCC GCGACTGTGA AGAAGGCGGA
GAGAATATCG GCTGGAACCA GACTGGTGAA TGGTACCACT ACAATGTAAA TGTGCAGGCG
GCAGGGCCTT ATCACCTGGA ACTCCGGTAT GCCACTACTT ACACCGCTTG TAAAGTCCGT
GTATCCTGTG ATGGCGCAGA TGTTTCCGGC ATTGTGGCGA TCCCCGCAAC AGGCGATTGG
TCAGCCTGGC GTACAGCCGT ATTGAAGAAC CTGAATTTGC CGGCAGGTAA TCATACCATC
CGCCTGGAGA CGGTAGAAGG GGAATTTGAT TTCTCCTCAT TGAAGTTTGA ATCAGGAACG
ACAACGGCGC CCAATGGTTC GGATAACTTC AATTCCGGTA GCTTCTCAGG ACTGTGGAAT
TATGATAACG GCAATTACTC CATTGCTTCC GGCAGGGCGG CTATTGATGG ATTTGGCAAA
CGCCTGATGG GAAATGCAGG ATGGACGGAT TATACGGTAG AAGCGGATGT GCAATGTCCT
TCTGGCGGTA ATGGCGGATT GATATTCAGG GTGAGAAACC CGGCAGCCGC AGAATTCGGT
ACTTCCAATG CCCTTAGTTC TGATTACTTT CAGGGCTATT ACGCAGGCAT AGACGCCGGT
GGCATTGTGT TGGGAAAACA GAACTATAAC TGGACTTCCC TGGCTTCCAA AACACAGGCA
TTGAGTCCGG GACAAACCTA TAAACTCAGG GCCGTATTAA ACGGAGCTAA CATAAAGATC
TATCTCAATG ATATGTCTAC GCCGGCAATC GATTATACCG ATCCTTCTCC ACTGATCAGT
GGTAAGGCAG GTATCCGTAC ACACGCGGCG AATATGGCTT TCGATAACTT CCAGATATCG
CAGGAATTAA GCGCCCTGAT ATTCAGGTGT CGCGTGGATA TACCATAA
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| Protein sequence | MPSHFFVPCL KGSTIQRKNT IVRHLFTLLF SVILCSTQVY SQVINPRTLP QEWGEYGIGD
PYILKFRGKF YLYCSTRDDQ SGVKCWSSWD LANWTYEGLC VDNTVTITKG AYAPEVIYWN
GTFYMYTSPA GNGHYILSSG SPTGPFTVQT GNIGHTIDGS VFIDDNAQMY FTYAGGSGIQ
AAAMSGPLAI TGAGSTLSGT SLNGWTEGST LFKRNGIYYM TYTGNHVFSR GYRVHYATAT
TPLGAYTAGT NNPIVLNTEG SFFGLGHSGS VIGPDLDTWF IAYHNLLGQS SIVGPNRKLN
IDPMGFNGDK LLVYGPTYWT QPSPALPTFY DRFDRTAIGS NWTNINGGNW GIFNQELMWQ
DNKTTTQWYR QVTTATSAAD YTAEFNMKEM SRGGNGARFG AVFSYVDENT FGSALLSSFN
NTLETDVKVN GVSVGVSAIP LPAGWDYQKW HVIRVEKQGT TFRIYLDGML KSTRTANITA
GGKIGVATYN DHADFGFTAF SNRVNGSGVF GFYKPVPGTI PAVHYNEGGE GVGYHDLTIE
NTGGKYRTDR VDIRDCEEGG ENIGWNQTGE WYHYNVNVQA AGPYHLELRY ATTYTACKVR
VSCDGADVSG IVAIPATGDW SAWRTAVLKN LNLPAGNHTI RLETVEGEFD FSSLKFESGT
TTAPNGSDNF NSGSFSGLWN YDNGNYSIAS GRAAIDGFGK RLMGNAGWTD YTVEADVQCP
SGGNGGLIFR VRNPAAAEFG TSNALSSDYF QGYYAGIDAG GIVLGKQNYN WTSLASKTQA
LSPGQTYKLR AVLNGANIKI YLNDMSTPAI DYTDPSPLIS GKAGIRTHAA NMAFDNFQIS
QELSALIFRC RVDIP
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