Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2968 |
Symbol | |
ID | 8359131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3661118 |
End bp | 3661705 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965149 |
Product | metal dependent phophohydrolase |
Protein accession | YP_003122647 |
Protein GI | 256421994 |
COG category | [R] General function prediction only |
COG ID | [COG4341] Predicted HD phosphohydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR03276] phosphonate degradation operons associated HDIG domain protein |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000380455 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000533169 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACTGA ACAGGCAGGA GATTGAAGCG CGTATAGAGG CCATCTTCAA TCTGTATAAT AAGTACGGTC AGGAGGAATA CGGAGAAGGC GTTACACAAT TAATGCACAT GGTGCAGGCG GGTAAACTGG CGCAACAGGA AGGTTACGAT AATGAAATGA TACTGGCTGC TTTTTATCAT GATATCGGGC ATTTCCTGGA ACACGGGGAA AGCATGGGGG TATACGGGAA AATGGCACAT GATCAGTTGG GCAAACAATA CCTTGCAGAA AACGGTTTCC CTGAAAAGAT GGGTATACTG GTCGCAAGTC ATGTAGACGC CAAACGCTAT CTGACCTACA GCAATGCAGC CTATTACGAC CTGCTTTCCG AGGCTTCCAA AAAGACACTG GAATACCAGG GCGGACCGAT GACGGCTGAA GAAGCAGCCG ACTATGAAAA AGATCCTTTG CTCGACAGCT ATATCAAGCT GCGTTACTGG GATGACCAGG CCAAAGAGAT CGATATACCG GTAAATCCGG CGGATGTGCA GATGTTCCGG GAACTTACGC TGCAATACCT GCTGGCATAC CATGGATTAC CTGCATAA
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Protein sequence | MQLNRQEIEA RIEAIFNLYN KYGQEEYGEG VTQLMHMVQA GKLAQQEGYD NEMILAAFYH DIGHFLEHGE SMGVYGKMAH DQLGKQYLAE NGFPEKMGIL VASHVDAKRY LTYSNAAYYD LLSEASKKTL EYQGGPMTAE EAADYEKDPL LDSYIKLRYW DDQAKEIDIP VNPADVQMFR ELTLQYLLAY HGLPA
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