Gene Cpin_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2963 
Symbol 
ID8359126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3653403 
End bp3654269 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content46% 
IMG OID644965144 
Productprotein of unknown function DUF808 
Protein accessionYP_003122642 
Protein GI256421989 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000127698 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000223824 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATCGG GTATTTTTGC AATTTTAGAT GATATAGCCA GCTTAATGGA CGACGTGTCT 
GTGGCGGCTA AAGTAGCAAC CAGAAAAACA GCAGGGATCT TAGGAGATGA TCTGGCCGTA
AACGCGGAAA AAGCAACCGG TTTTCTGGCT TCCAGGGAAT TACCTGTATT GTGGGCCATC
ACCAAAGGTT CTTTACTGAA CAAGCTCATC ATCGTTCCGA TCGCTTTATT GCTGAATGCA
TTTTTTCCTA TCGCCATCAA GGTTGCATTG GTACTCGGCG GATTTTACCT GGCATATGAG
GGCGTAGAAA AGATTATAGA GTATTTTTTC CATCACGAAG CAGCAGGTCA TGAAGCAGCG
GAAGCTGTGC AGCTCAGTGC CAGTGAGGCA GAAAAAGCGA AGATCAAATC TGCGATTGTA
ACTGACTTCA TCCTTTCTGT AGAGATCGTC ATTATTGCCC TGGGATCTGT ACTGGAAGCA
GAACTGGTTA CACAGATCCT GACCGTTTCC ATTGTTGCCA TACTGGCGAC GATCGGTGTA
TACGGTATCG TTGCCCTCAT TGTCAGAATG GACGATGCAG GATTTAAACT GATCAAACAC
TCCGGCAATA AAGGGGCACT CTCTGTATTA GGAGGTTTGC TGGTAAAAGC ACTTCCATTG
ATTATCAGAA TGCTGGCCGT TGTCGGAACA ATTGCTTTAA TCCTTGTTTC AGGGGGCATT
TTCGTTCATA ACATCGACTT TTTACATCAC CTGCTGCCGA CGTGGCCATC CTTTATTAAA
GAGGCCGGCA TCGGACTACT TGCCGGTTTA TTGACAGTAG GTGTCGTAAC CGTTAGTAAA
AAGATCGTGG CATTGGTAAA GCGCTAA
 
Protein sequence
MASGIFAILD DIASLMDDVS VAAKVATRKT AGILGDDLAV NAEKATGFLA SRELPVLWAI 
TKGSLLNKLI IVPIALLLNA FFPIAIKVAL VLGGFYLAYE GVEKIIEYFF HHEAAGHEAA
EAVQLSASEA EKAKIKSAIV TDFILSVEIV IIALGSVLEA ELVTQILTVS IVAILATIGV
YGIVALIVRM DDAGFKLIKH SGNKGALSVL GGLLVKALPL IIRMLAVVGT IALILVSGGI
FVHNIDFLHH LLPTWPSFIK EAGIGLLAGL LTVGVVTVSK KIVALVKR