| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2961 |
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| Symbol | |
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| ID | 8359124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3647312 |
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| End bp | 3649093 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644965142 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003122640 |
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| Protein GI | 256421987 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.80043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000000094968 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTCATC TTAAAATGTT ACTATTTGCG CTGTTGTTTG CAGTTGTCGG TCATCATTGT
TTTGCGCAGG AATCCCTCCC TCCTGCAGGC GTTGACAGTA CCACAATTAA TGAAGCGTTG
CTGGTGAAGG AAGAACAGCA AAAGCGAATA GATTCATTAG TCAAACAACA GTTAACCAAA
GAACTAGCTG TTGTGGCCGG CAATGTCAAG CGTACAGAAG AACTTGAAGC ACAACTACGG
CGTATTGCAG TAAATGACTC TTTGCGCAAT ATCACACAAC TGGAAAAGCT CAAAGCCCTG
AAAAAAAGCA CAAATGGTTA TCCTGTTATT CTTAATCAGG ATACCTTGTT TTTTATTTTT
ACACGCACAG GGTCTTTTAA TGCAAGAGAC AGAGCCAGCG CGGTATCAGG TAAAATAGAG
CGATTGTATA AAGCCCCTTT CTTCGAAGCT GATTCACTGG TAATGGTTGA AAACGAAGGT
TATTATGACA TCATCTACAA CAACAATGAA GTTATTATCA GCATAGGTAA TCTGGACGGA
CTTTGGTTTG GCAAAAGCAA TATAGATCTG GCCCAAACGT ATCTGGCTAT CATCAAACAA
ACTATTACGA AGGAACGCTC GTCACATAGT CTTGTTAACC TGCTGAAAAG GATTGCCCTT
GTAGGAGTGA TCATTATCCT GCTGACGCTC ATTGTCGTAC TGGTAAATAA AATCTTCCGC
CGGATAGCTG TATTCATATC AAAAAACAAA GAAAAATACC TGCATGACCT CCGTCTCAGA
AAGATAAAAA TCATAACCGC TGTCCATCTC GAAAAGGCAT TGCTCAGATT AAACACGGTC
ATAAAGATCC TGTCTATTGT CCTGATCGTT TACCTGTCAT TTCCCCTTTT GTTCAGTGTA
TTTCCTGAAA CAGAAGCCTG GACCGACACA CTCCTTAAAT GGATCTTATC TCCATTAAAA
TCTGCAACCA GAGCTATCAT AGACTATCTA CCCAATCTCT TCAAGGTAAT AGTGATTTAT
TTCATTTTCA GGTATCTGCT GAAAGGGATC AGATACTTTT TCGATGAAGT GAAAGGAGGG
AATATTCAAC TTGGCGGATT TCATCCTGAC TGGGCAATAC CTACTTTTAA CATCCTCCGG
TTTGTGCTTT ACGCGTTTAT GTTAGTGCTG GTATTTCCTT TCCTTCCCGG CTCCGGCTCA
CCCGCTTTCC AGGGAGTATC CGTATTTCTT GGCATCCTCA TTTCACTCGG TTCATCCAGT
GCTATTACTA ATATTGTGGC AGGTCTCGTT ATTACTTATA TGCGTCCGTT CCGCATTGGG
GACCGGGTAA AGATTGGTGA GGTTGTCGGA GATATTGTAG AAAAGTCTAT GTTGGTAATA
CGGATAAAAA CGATTAAAAA TGAAGATGTG ACGGTGCCCA ATTCGATGGT ATTGTCCAGT
TCGACGATCA ATTATTCAAG TCACACCAAA AGTGAAGGTC TTATTGTACA CTATACTGTT
ACGATCGGGT ATGACGTACC CTGGCAACAG GCATATGAAT TGCTGATTGC GGCGGCGTTA
AAGACTGTAC ACGTAGAGGA AGCTCCCAAA CCATTTGTGT TGCAGACCAG TCTTGATGAC
TTCTATATCT CTTATCAGAT CAATGCTTAT ACAAAAGAAG CGAACAAACA GGCAGTGATA
TATAGCAATC TTCTTGAAAA CATTCAGGAT GTTTTTAACA ACGCCGGAAT AGAGATTATG
TCTCCCAACT ACCATGTAGT CAGGGATGGG GGAAAGGTAT AA
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| Protein sequence | MVHLKMLLFA LLFAVVGHHC FAQESLPPAG VDSTTINEAL LVKEEQQKRI DSLVKQQLTK
ELAVVAGNVK RTEELEAQLR RIAVNDSLRN ITQLEKLKAL KKSTNGYPVI LNQDTLFFIF
TRTGSFNARD RASAVSGKIE RLYKAPFFEA DSLVMVENEG YYDIIYNNNE VIISIGNLDG
LWFGKSNIDL AQTYLAIIKQ TITKERSSHS LVNLLKRIAL VGVIIILLTL IVVLVNKIFR
RIAVFISKNK EKYLHDLRLR KIKIITAVHL EKALLRLNTV IKILSIVLIV YLSFPLLFSV
FPETEAWTDT LLKWILSPLK SATRAIIDYL PNLFKVIVIY FIFRYLLKGI RYFFDEVKGG
NIQLGGFHPD WAIPTFNILR FVLYAFMLVL VFPFLPGSGS PAFQGVSVFL GILISLGSSS
AITNIVAGLV ITYMRPFRIG DRVKIGEVVG DIVEKSMLVI RIKTIKNEDV TVPNSMVLSS
STINYSSHTK SEGLIVHYTV TIGYDVPWQQ AYELLIAAAL KTVHVEEAPK PFVLQTSLDD
FYISYQINAY TKEANKQAVI YSNLLENIQD VFNNAGIEIM SPNYHVVRDG GKV
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