| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2956 |
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| Symbol | |
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| ID | 8359119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3639517 |
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| End bp | 3641811 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965137 |
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| Product | alpha-1,2-mannosidase |
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| Protein accession | YP_003122635 |
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| Protein GI | 256421982 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.756886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000545459 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACAGAC ATATATACAT TATTATCGTT ATAGCCATCT TTAGCTCCTG TGTAAGTCAG
CGGGAAAACC TGTCCCGGTA TGTAGATCCG GGTATCGGTA CCGCCCATAG CCGCTGGTTC
TTTTATACCC CGGCCGCGTT ACCGCATGGT ATGGCGAAAC TGGCCCCTTC TACAAACGGG
CATTATGGTA ATCCCAGTGG ATGGGAAGCT GTTGGTTATG ATACCCGGCA CCGGTCTATA
GAAGGATTTG CGCATTTTCA TGAATGGCAG GTAGGCGGGA TTGTCGTGAT GCCTGCGACC
GGTCCGAGGA TACTGACACC CGGCAGCCTG GAAGATGCAG AAAAAGGACT TAAAAACGGT
TATAGATCCC TCTTTGACCA TAAAAGCGAG GTAGCCCAAC CGGGATATTA CAAGGTAAAA
CTGGATGACT ATCACATCAC TGCCGAACTG ACGGCCACTG AACGGGTGGG TTTTCACAGG
TATACCTTTC CGGCAGCACC TGATTCCAGG ATTATACTTG ATATTGGCAA TAAACAGGGA
GAAAGTGGTG AAGTACTGGA TGCAGCAGTA CACATGACGG ATGAAAGACA TTTCGAAGGA
TTCGTCACCA CCTACCCTGC CTACATCAAA AAGTATGATC CACAGGGAAA AATATCCATG
TATTTCTATG GAGAGATCAG CAAGCAGCCC GCCACTGTAG GTGCATTCAA TGCCAATGGT
ATACAGGAAA ACAGCAGGGA AAGTAAGGGC AAGGGTGCAG GCTTATTCCT TGAATTTGCC
ACTACTGATC AGGAAGTCGT AGAACTGAAA ATCGGTCTTT CCTATACGTC TACCCTTCAC
GCACAAAAGA ACCTGGTGGC AGAGGCCACC GGTATTGACT TCAAAAAGGC ACAGCAACTG
GCAGCAAAGG TCTGGGAGGG TGAACTGGGC AAGCTTAAGG TCAGTGGTAA AGCAGTACAG
GATAAAACCA AATTCTACAC CGGACTGTAT CATGCGCTTT TAGGACGCGG TATTATCAAT
GATGCCGGAC AAGCGAATTT ATATAATACG GATGCTATCT GGGGCGCTTT CTGGAACCTG
ACGCAACTCT GGGCACTGGC TTATCCGGAA CATTACAATG ACTATGTACG TTCGCAGATC
GATGTGTATC AGAAACGGGG ATGGTTTGCA GATGGTGTTA CCAATGGCTA TTTTACTTCC
GGCGTCGGTA CCAACTTTGT GGGACTGGCA ATTGCGGCTG CTTATCAATG TGGTATACGT
GATTATGACA CAACATTAGC TTACAAGGCC ATCAGGGAGA ATGAGACTGA TGGTACAGAC
AGGCCCGTAG GATCCGGAAA ACTGGATGTA GCAGCCTTCA ATCACTATGG CTACTCCCCT
TATCTTGAAG AGGATAAGAC TGATTCGACC GGGTCCCGGT TTGCGGCCTC TCATACACTT
GAATATAGTT TTAGTGCATT TGCTACCGCA CAAATGGCGA AGGCCATGGG TAAAACAGCG
GACTACGACT ATTTCATTGG CAAATCGAAG GGATGGCAAC GGCTCTTTAA TCCTGCATCC
AAACTGATAC AACCTAAAAC TGTCAATGGC CAGTTTATTG ACAAATTTGA TCCCCTGGAA
CCCTGGCGGG GATTCCAGGA AGGGAATGCC GTACAGTATA CCTTCTATGT ACCACAAAAT
CCGGCTGGTC TGATCGAGGC CATCGGTAAA GAGGAATTCA ACACGCGGCT TGACAACATC
TTTACGGTTG CCCGGCAAAA CAGCTTTGGC GGCGGGAAGA CAATCGATGC GTTTGCAGGT
ATCAAGGCCA GTTACAATCA TGGTAATCAG CCTAACCTGC ATGTCAGCTG GTTATTTAAT
TATTCCGGTA AACCCTGGCT GACGCAAAAA TGGACCCGTG CCATCTGTGA CGAGTTCTAT
GGTACAGAAA GCATACATGG TTATGGATAT GGTCAGGATG AAGACCAGGG CCAGCTTGGC
TCCTGGTATG TGATGGCCGC ATTAGGATTG TTTGATGTGA AAGGATTGAC AGACCTTCGA
CCAGTGATAC AGCTGGGTAG TCCGGTATTT GACCAGGCAA GTATCCAACT GGGCAATGGT
AAAACCCTCC ATATCACCAC CGAAAATAAC AGCAAGGAAA ATATATATGT GCAGGAAGCC
CGCTTTAATG GTAAACCATT GGAGAACGCG TGGTTGTACC GCGATGAGCT GATGAAAGGA
GGTAAACTAT GGATGAAGAT GGGGAATGTG CCGAATGAAA AATGGGGTAG AGAGGCGCCA
CCTTCTGTGC AATAA
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| Protein sequence | MYRHIYIIIV IAIFSSCVSQ RENLSRYVDP GIGTAHSRWF FYTPAALPHG MAKLAPSTNG
HYGNPSGWEA VGYDTRHRSI EGFAHFHEWQ VGGIVVMPAT GPRILTPGSL EDAEKGLKNG
YRSLFDHKSE VAQPGYYKVK LDDYHITAEL TATERVGFHR YTFPAAPDSR IILDIGNKQG
ESGEVLDAAV HMTDERHFEG FVTTYPAYIK KYDPQGKISM YFYGEISKQP ATVGAFNANG
IQENSRESKG KGAGLFLEFA TTDQEVVELK IGLSYTSTLH AQKNLVAEAT GIDFKKAQQL
AAKVWEGELG KLKVSGKAVQ DKTKFYTGLY HALLGRGIIN DAGQANLYNT DAIWGAFWNL
TQLWALAYPE HYNDYVRSQI DVYQKRGWFA DGVTNGYFTS GVGTNFVGLA IAAAYQCGIR
DYDTTLAYKA IRENETDGTD RPVGSGKLDV AAFNHYGYSP YLEEDKTDST GSRFAASHTL
EYSFSAFATA QMAKAMGKTA DYDYFIGKSK GWQRLFNPAS KLIQPKTVNG QFIDKFDPLE
PWRGFQEGNA VQYTFYVPQN PAGLIEAIGK EEFNTRLDNI FTVARQNSFG GGKTIDAFAG
IKASYNHGNQ PNLHVSWLFN YSGKPWLTQK WTRAICDEFY GTESIHGYGY GQDEDQGQLG
SWYVMAALGL FDVKGLTDLR PVIQLGSPVF DQASIQLGNG KTLHITTENN SKENIYVQEA
RFNGKPLENA WLYRDELMKG GKLWMKMGNV PNEKWGREAP PSVQ
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