| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2921 |
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| Symbol | |
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| ID | 8359083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3598875 |
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| End bp | 3600302 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965102 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003122601 |
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| Protein GI | 256421948 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.542365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAA CCGCTGAACA TCTTTATCTT CAGATTGCCG ACAAACTGGA GCAACTTATT
GCCAAAGACG TATTGAAAAT TGGAGACAAG CTTCCTTCTG TTCGTACCAT GAGCGAGGAA
CAGGGAGTTA GTATGAGTAC TGCTTTTCAG GCTTATTATC ATCTGGAAGC GAAGGGACTT
ATTGAATCCC GTCCTAAGTC GGGGTACTAT GTCATCTTTA GTCCGCGGCG GATGCCGGAG
ATGCCTAAAG TCTGTGAGGC TGTTAAAAAG CCTTCGGAGG TTACTGTGCA TGAAATGGTG
ACACAGGTTT CTCAGGATAT GAGATTGGAA AATATTACCC GGTTTGCTTC TGCTGCGCCG
CCGGAGTCGA TGTTGCCGGC TGCCAAAATC TCTAAAGCAC TTATACAGGC GCTGCGGAAA
ACACCTTTTG CGGGTGTGGG ATATGAGCCT GTGCAGGGGA ATCCTGATCT CCGCAGACAA
ATAGCCCGTA ATTCTATTCT GTGGGGTGGT GCTGTCAGTG AAGATGAGAT CGTTACTACA
AGTGGTTGTA TGGATGCGCT GACACTTTGT TTGTCAGCCG TTACGCAACA GGGAGATACG
ATTGCGATTG AAAGCCCGGC GTATTATGGT TCCCTCCAGC TGGCAGAAAC GCTTGGACTG
AAGGTGCTGG AAATACCTAC GCATCCTGGT ACAGGGGTCG ACCTGGAATA CCTGGATAAG
GCTATTCCCA AGTTTAAGAT CAAAGCCTGT CTCTTTGTGA CCAATTTCAC CAATCCGCTG
GGCGCCTGTA TGCCGGACAC ACATAAGCGT GAACTGGTGA GGTTACTGGA GAAATATGAG
ATCCCATTAA TAGAGGACGA TATTTATGGG GATATGTACT TTGGTAAAGA ACGTCCTGGT
GTCTGCAAAA CTTTCGATAC CAATGGACTT GTGTTGTTAT GTAATTCCTT TTCCAAGTCC
GTCGCACCGG GTTATCGTGT AGGCTGGACA ATTCCCGGCA GATACCTGGA GAAAGTACTG
AACCTGAAAA GGCATCACTC TATCTCCTCT CCTTCCCTTC CGGGTGCAGC AATTGCCTGT
TTCCTCGAAA ATGACCGCTA TGAGCATCAC CTGAGAGGAA TGCGTAAAGC CCTGCATACA
CAGTATATGC GACACCTGCA GGCGATCAGA GAGTATTTTC CGGAGGATTG CTGCGTGTCT
CGTCCGCAGG GAGGTTTTGT ACTATGGGTG GAACTGAATC CGAAAGTGAA TACATATGAG
TTGTATGAAC AGGCAATCAA GCATAAGATA TCTTTTGCAC CCGGCAGGAT ATTCTCTTTA
CAGGATCGTT ATACAAACTG TATGCGTATC AGCTATAGTA ATCCCTGGAG CAAACAGATG
GACGACGGAC TCAAAACACT GGGCAGACTT ATCAGAAAGC TATCATAA
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| Protein sequence | MLKTAEHLYL QIADKLEQLI AKDVLKIGDK LPSVRTMSEE QGVSMSTAFQ AYYHLEAKGL
IESRPKSGYY VIFSPRRMPE MPKVCEAVKK PSEVTVHEMV TQVSQDMRLE NITRFASAAP
PESMLPAAKI SKALIQALRK TPFAGVGYEP VQGNPDLRRQ IARNSILWGG AVSEDEIVTT
SGCMDALTLC LSAVTQQGDT IAIESPAYYG SLQLAETLGL KVLEIPTHPG TGVDLEYLDK
AIPKFKIKAC LFVTNFTNPL GACMPDTHKR ELVRLLEKYE IPLIEDDIYG DMYFGKERPG
VCKTFDTNGL VLLCNSFSKS VAPGYRVGWT IPGRYLEKVL NLKRHHSISS PSLPGAAIAC
FLENDRYEHH LRGMRKALHT QYMRHLQAIR EYFPEDCCVS RPQGGFVLWV ELNPKVNTYE
LYEQAIKHKI SFAPGRIFSL QDRYTNCMRI SYSNPWSKQM DDGLKTLGRL IRKLS
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