Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2920 |
Symbol | |
ID | 8359082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3597690 |
End bp | 3598805 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644965101 |
Product | ABC-2 type transporter |
Protein accession | YP_003122600 |
Protein GI | 256421947 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.827824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACAT TACGCTTACT ACTGGAAAAG GAATTCAGGC AGATCTTCCG TGATAAAGGC TTACTGCCTA TCATCTTTGT GATGCCGATG ATGCAGCTGC TGATCATGCC ACTGGCTGCG AATTTCGAGG TAAAGAATAT CAATCTGGCT GTTGTAGACA GGGATCATTC TACTTATACA CAACAGATGG TGGCTAAGAT CGCCTCTTCC GGTTATTTTC ATATTACAGG TTATTATACG GATTACACAC CCGCAAGACA ACAGATCGAA CGGGAGAAAG CGGACATTAT CCTGGAAATA CCACCTCACT TTGAAGTAGA CCTTGTAAAG GAAAATAAGG CATCAGTATA TATAGCTGCT GATGCGATTA ACGGCACAAA AGCCGGTCTG GGAAGCGCTT ATCTCAATAC CATACTGACG GACTTTAACA ATGAGATCCG GATGAAGTGG TTGCCGGAAG CACCACCCGG ACCAGGTACT ATAGACGTAA CGTTTTCAAA CTGGTTCAAC CCGAATATGA ACTATCGTTT GTATATGGTG CCGGGAATAC TGGTATTACT GGTGACCATG GTAGGAGGCT TTATCGCCGC TTTAAATATC GTAAAGGAAA AAGAGATCGG CACCATTGAA CAGATCAATG TAACACCTGT TAAAAAGTGG CAGTTTATCC TTGGTAAGCT GATTCCCTTC TGGGTGATTG GCATGGTTGA CTTCACCCTG GGATTGTTAC TGGCGAGATT TGTCTATGGT ATTATTCCGT TGGGTAGTCT GTTGCTCCTG TACGCGTTTC TGGCTGTTTA CCTGGTAGCA TTGCTGGGAT TCGGCCTGTT GATCTCTACT TACAGCGATA ACCAGTTGCA GGCGATGTTT GTGGCATTCT TCTTCATTAT GATCTTCATG CTGATGAGTG GACTCTTTGT TTCGGTGGAT AATATGCCGC CATGGGCGAA GATGATTGCC AACTTAACCC CGGTGACACA TTTTATAGAT GTGATGAGAA TGGTGGTGTT GAAAGGGAGT CGCTTTGCGG ATATAAAAAT GCAATTCCTG TACGAACTGG CCTTTGCATT GGTATTGAAT GGCTGGGCTA TCTGGAACTA TCGTAAAACA GCATAA
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Protein sequence | MRTLRLLLEK EFRQIFRDKG LLPIIFVMPM MQLLIMPLAA NFEVKNINLA VVDRDHSTYT QQMVAKIASS GYFHITGYYT DYTPARQQIE REKADIILEI PPHFEVDLVK ENKASVYIAA DAINGTKAGL GSAYLNTILT DFNNEIRMKW LPEAPPGPGT IDVTFSNWFN PNMNYRLYMV PGILVLLVTM VGGFIAALNI VKEKEIGTIE QINVTPVKKW QFILGKLIPF WVIGMVDFTL GLLLARFVYG IIPLGSLLLL YAFLAVYLVA LLGFGLLIST YSDNQLQAMF VAFFFIMIFM LMSGLFVSVD NMPPWAKMIA NLTPVTHFID VMRMVVLKGS RFADIKMQFL YELAFALVLN GWAIWNYRKT A
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