Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2919 |
Symbol | |
ID | 8359081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3596587 |
End bp | 3597693 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965100 |
Product | ABC-2 type transporter |
Protein accession | YP_003122599 |
Protein GI | 256421946 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.856849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAT TCATGGTATT TGTCAGAAAG GAATTTTATC ACGTCTTCCG GGACAGGCGT ACCCTGCTGA TACTCTTCGG ACTGCCGATC ATGCAGATCC TCCTTTTCGG CTACGCGCTC ACCACCGAGA TCAAAAATGC GGAGATCATT ATTGTAGATC ATGCCGGGGA TGCCGCTTCG CAACAGCTGA CTACCATGAT CGCTGCCAGC AAATATTTTG ATATCAACAG AAGCACTGCT TCAGATGAAG ATATTTATAA AGCATTTAGG CAAGGGAAGG TAAAATGCGC GGTGGTATTC CCGACTGGCT TTGGAAATGA TCTGCTGAAC GGACAGGTGG CACAGTTACA GGTGATAGCT GATGCTTCTG ATCCGAATAC GGCCAAAACG CTGACTAATT ATATTACTGC GATTGTAGCG GATTATCAGC AACAGGTCAA TCCGACGGCT AACATCCCGA TGCGGATAGA CCCCGTTACC CGTATGCTCT ATAATCCCGA ACTGAATGGT TCGATGAACT TTGTACCTGG TGTAATGGCC CTGGTATTGA TGATCATCTG TACTACACTG ACCTCCGTAT CCATCGTAAG AGAAAAGGAA ATGGGTACCA TGGAAATACT GCTGGTATCG CCATTCAAAC CCGTTTATGT GGTACTGGCA AAAGCAGTGC CTTATCTGGC ACTGGCGATG GTCGATTTCG TCATCATACT GATACTAAGT GTACTTGCCC TGGAAATGCC GGTCAGGGGA AACCTGGCAC TTCTGTTCTT CGAAAGCACA CTGTTTATTA TCAGCTGTCT TTCCCTCGGA TTACTGATCT CCAGCGTCAC CCGTTCCCAG CAGACGGCCA TGATGGTCTC TATGATGGGC ATGATGTTGC CTACCATTCT TTTTACAGGT TTCATCTTTC CGTTGGAGAA TATGCCCTTA CCGCTTCAGT TGATTTCCAA TCTGCTGCCA TCCCGCTGGT TTTACGTCAT CGTAAAAGCC GTGATGTTGA AAGGGTTGGG TATCGGAGTG GTCTGGAAAG AAACACTCAT ACTGGCAGGT ATGACCCTGG TATTACTAAC CATCAGTATT AAAAGCTTTA AAACACGGCT GTCATGA
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Protein sequence | MKQFMVFVRK EFYHVFRDRR TLLILFGLPI MQILLFGYAL TTEIKNAEII IVDHAGDAAS QQLTTMIAAS KYFDINRSTA SDEDIYKAFR QGKVKCAVVF PTGFGNDLLN GQVAQLQVIA DASDPNTAKT LTNYITAIVA DYQQQVNPTA NIPMRIDPVT RMLYNPELNG SMNFVPGVMA LVLMIICTTL TSVSIVREKE MGTMEILLVS PFKPVYVVLA KAVPYLALAM VDFVIILILS VLALEMPVRG NLALLFFEST LFIISCLSLG LLISSVTRSQ QTAMMVSMMG MMLPTILFTG FIFPLENMPL PLQLISNLLP SRWFYVIVKA VMLKGLGIGV VWKETLILAG MTLVLLTISI KSFKTRLS
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