Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2918 |
Symbol | |
ID | 8359080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3595829 |
End bp | 3596572 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965099 |
Product | ABC transporter related |
Protein accession | YP_003122598 |
Protein GI | 256421945 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.79893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACA AGGCAATCAC CTGTAAAGAT CTTACCAAAC GTTTCGGGGA CTTCTTTGCA GTCAATCATA TCTCATTCGA AGTGGAACAA GGGGAGATTT TCGGCTTCCT TGGCGCCAAT GGCGCCGGCA AGACGACAGC TATGCGTATG CTCTGCGGAC TGTCTTACCC TACTTCAGGA GAAGCGACCG TAGCGGGTTT TAATGTGTTC GGACAACAGG AAGAGATTAA AAAGAATATT GGCTATATGA GTCAGAAATT CTCACTGTAT GAGAGTCTGA CCGTAAGAGA AAATATCCGT TTCTATGGCG GCGTATATGG CTTATCAGAT AAACAGCTAA AAGAGAAGGG AGACGAACTG ATTGAAAAGC TAGGTATGCA GCAGGAAGCA AAGATGATGG TGGGGAGTCT GCCGCTGGGC TGGAAACAAA AGCTCGCATT CTCTGTAGCC ATTATCCACC AACCCCGGAT TGTATTCCTG GATGAACCGA CTGGTGGCGT AGATCCCGTT ACAAGGAGAC AGTTCTGGGA CCTGATCTAT GATGCAGCAG AAAGGGGGAT TACAGTATTC GTTACCACGC ACTACATGGA TGAAGCAGAA TACTGTAACC GGATCTCCAT CATGGTGGAT GGGCGCATAG ATGCACTGGA TACACCAGCG AACTTACGCC GGCAATTCGG GGCAAACTCC ATGAACGAAG TATTTTATGC ACTGGCGAGA AGCGCAAAAC GCTCTGCCGA CTAA
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Protein sequence | MNNKAITCKD LTKRFGDFFA VNHISFEVEQ GEIFGFLGAN GAGKTTAMRM LCGLSYPTSG EATVAGFNVF GQQEEIKKNI GYMSQKFSLY ESLTVRENIR FYGGVYGLSD KQLKEKGDEL IEKLGMQQEA KMMVGSLPLG WKQKLAFSVA IIHQPRIVFL DEPTGGVDPV TRRQFWDLIY DAAERGITVF VTTHYMDEAE YCNRISIMVD GRIDALDTPA NLRRQFGANS MNEVFYALAR SAKRSAD
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