Gene Cpin_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2917 
Symbol 
ID8359079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3594898 
End bp3595821 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content46% 
IMG OID644965098 
ProductABC transporter related 
Protein accessionYP_003122597 
Protein GI256421944 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.528915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACAG TCGTACTGGA AAATATCAGC AAATCCTATA TAAAGGATGC GCCTCCGGCA 
TTGGAAAATG TATCCTTCTC AGTAAAGAAA GGAGAGCTTT TCGGACTGAT AGGGCCGGAT
GGCGCCGGTA AATCTACCAT CTTCCGCATA CTGACTACCT TATTGTTGTC AGACGCCGGT
AAGGCTACCG TAGCCGGATA TGACGTGGTG AAAGACTTCC ACCAGATCCG TAGCTGCGTA
GGATACATGC CAGGCAAGTT TTCACTTTAT CAGGACCTGA CCGTAGAAGA AAACCTGAAT
TTCTTTGCCA CACTGTTTGG TACGACCATC GCTGAAAACT ATGCGCTGAT CAAAGATATC
TACGAACAGA TTGCGCCCTT TAAAGACAGA CGTGCCGGTA AGTTATCAGG TGGGATGAAA
CAGAAACTCG CACTTTCCTG TGCACTGGTG CACCGGCCGG AAGTACTCTT TCTTGACGAA
CCTACCACAG GTGTCGACGC TGTATCGCGT CAGGAGTTCT GGGACATGCT GAAACGCCTT
AAAAATGAAG GCATCACCAT CGTCGTCTCT ACGCCTTATA TGGATGAAGC CAGTCTTTGT
GAAAGAATCG CTTTGATCCA GACAGGACAC ATCCTCTCCA TCGATACACC GGATAATATC
GTAGCTGCTT ACCCTGGCAA ATTGTACGCA CTCAGGTCGC CGAAAGTACA CCTGTTATTG
CCGGATACAA GAAGCTATGA AGGCATCAGG CAATGTTATG CTGCAGGCGA AAAACTGCAT
GTTGCCTTTC AGGAAGATGG AAAAGACCAT CCTGCACAAT TGCTGACTTA CCTCAAAAAC
AAAGGTCATC AGACAGTAGA TATAAAGGAG ATAAGACCGG ATATCGAGGA TTGTTTTATC
GAAAAATTAA GTAACCCGAA ATAG
 
Protein sequence
MDTVVLENIS KSYIKDAPPA LENVSFSVKK GELFGLIGPD GAGKSTIFRI LTTLLLSDAG 
KATVAGYDVV KDFHQIRSCV GYMPGKFSLY QDLTVEENLN FFATLFGTTI AENYALIKDI
YEQIAPFKDR RAGKLSGGMK QKLALSCALV HRPEVLFLDE PTTGVDAVSR QEFWDMLKRL
KNEGITIVVS TPYMDEASLC ERIALIQTGH ILSIDTPDNI VAAYPGKLYA LRSPKVHLLL
PDTRSYEGIR QCYAAGEKLH VAFQEDGKDH PAQLLTYLKN KGHQTVDIKE IRPDIEDCFI
EKLSNPK