| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2904 |
|---|
| Symbol | |
|---|
| ID | 8359066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 3582692 |
|---|
| End bp | 3584725 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644965085 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003122584 |
|---|
| Protein GI | 256421931 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.141034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTA AACTCAGCTT CCTGTACCCA ATTTTAATCC TGCTGTTTGC CAACATTGTT
AGAACGCAGG CTCAGACCAC TTGCACAGGG ATTGGTCAGA ATGCTTCCAC GGCCTTCCCC
GTCTGTGGAA CAAAAGTCTT TAGCCAGGAG TCCGTTCCTA TCTGTGGCGG CAGACCTATT
CTGGGTCCCG GTTGTAATGG CAGTGGTGAC GGCGGACATA CAGATATCAA CCCCTTCTGG
TATAAATTCA CATGTTATAA AGGTGGTACA CTCGGATTTA AGATCACGCC TAAAGTCATG
GAAGATGACT ATGACTGGCA GATCTTTGAT ATTACCGGAC GTAACCCTAA CGATGCCTAT
ACAGACCGTA GCTTATACGT ATGTATGAAC TGGTCAGGGG AGGGCGGTAT AACGGGCGCT
TCCGGAGCAG GGACGTCTTT TGATGTGTGT GGTGGTTTGG GAATGTCGCT GTTCAGCAAA
ATGCCGACGC TGATAGAAGG ACACGAGTAC CTCTTATTGC TGAGCCACTT TACCCAGACA
CAGTCAGGGT ATGACCTGGA GTTTGGTGGT GGCACAGCCG ATATTACCAG TCCGGGTATA
CCAGCTGTTA AATGGGCAAG CTATTATTGC CATGATAATA CGATAGGTAT TAAGCTCAGC
AAGGAGACGC TTTGTAAGAC ACTTAGTACC AACGGGACCG AATTCATTTT AACCAGTGGT
ACCGGTACGA TTGTGGGTGC TACAGGTGTG AATTGTACCA ATGGATTCGA CGCCGATTCA
ATATTGGTGA AGACCAGCGC TCCGCTGGCG CCGGGAGATT ATACCATTGC AGTGAAGAAT
GGTAGTGATG GGAATACGAT ATTGGATATC TGTGGTAACG GACTCGCAGT AGGAGAACAC
GCAAGTTTCC GCGTTGAGGT TCCACCTACA GTGGTACTGT ATGATGTAGT AGCGCCAGGT
TGCGCGCCGG ATAAGATAAA GATTCCGTTA TCAGTGCCGG TACGTTGTGG TTCTATTGCA
CCTAACGGCA GTGATTTCAG ATTGAGCGGA TCGCCGGCAG CCAGTATCCG TGGTGCATCA
GGGATCTGTA ACAGCAATAA TCTGGCGGAT ACCGTCCTGA TAGAATTTAC GCAACCCTTA
TACCGGCAGG GAAATTATTC GATCACGCTG ACTACCGGTA GCGATGGTAC GCCGATATTG
GGAGAATGTG GTCAGCCGGC GCCTTTAGGA CAGGTGGTGA ATTTTCATAC AGTCGATACC
GTATCAGCAG ATTTTGATTT TGGTTTAAAT AGAAATTGTA AGTTAAGTGT GCTGGATCTG
ACACATAACG GCGCCAATAG CGTGAATTAC TGGCACTGGA ATTTCGATAG TACGGATAAT
CGCTATACGC AGAATGTCAA TAAAGTATAT GGTGACTTTG GCATCAAGAA GGTCTCTTTG
CTGGTTTCCA ATGGTGTATG CCGGGATTCA GTGTACAAGG AGATCAACCT GGAACGTACG
CTGGGAGCGA TCTTTAGCGT TGACCCCGGG CCTTATTGCC CGATGGACGT CGTATCGCCT
AAGAATGAAA GCTTCGGTAA CATCGTATCC TATCTCTGGG ATTATGGAAA TGGTATTACC
AGTATAGACG CCACACCATT GCCACAAACA TATTATCCTA CACGTAAGGA GCAGGATTAT
CGGATCCGCC TGATCGTACT GGATGCACAG AATTGTCTGG ATACAACAGA TCATGTGATC
AAAGCAGTTA CCAGCTGTTA CATCGATGTG CCTACCGCGT TTTCGCCTAA TAATGATGGA
AAGAATGATT TCCTGTATCC CTTGAGTGCA TATAAAGCAA CGGACCTCGA CTTTTCTGTA
TATAACCGTG TCGGACAACT CGTCTTCCAC TCAACGAACT GGACCCAGAA GTGGGATGGT
ACCGTGAAAG GATTACCTGC TGATATAGGT ACGTATGTCT GGATGTTACG ATATACAATA
ACAGATACCG GTAAGAAAGT ATTTAAGAAA GGTACTACCG TACTGCTGCG TTAG
|
|---|
| Protein sequence | MQSKLSFLYP ILILLFANIV RTQAQTTCTG IGQNASTAFP VCGTKVFSQE SVPICGGRPI
LGPGCNGSGD GGHTDINPFW YKFTCYKGGT LGFKITPKVM EDDYDWQIFD ITGRNPNDAY
TDRSLYVCMN WSGEGGITGA SGAGTSFDVC GGLGMSLFSK MPTLIEGHEY LLLLSHFTQT
QSGYDLEFGG GTADITSPGI PAVKWASYYC HDNTIGIKLS KETLCKTLST NGTEFILTSG
TGTIVGATGV NCTNGFDADS ILVKTSAPLA PGDYTIAVKN GSDGNTILDI CGNGLAVGEH
ASFRVEVPPT VVLYDVVAPG CAPDKIKIPL SVPVRCGSIA PNGSDFRLSG SPAASIRGAS
GICNSNNLAD TVLIEFTQPL YRQGNYSITL TTGSDGTPIL GECGQPAPLG QVVNFHTVDT
VSADFDFGLN RNCKLSVLDL THNGANSVNY WHWNFDSTDN RYTQNVNKVY GDFGIKKVSL
LVSNGVCRDS VYKEINLERT LGAIFSVDPG PYCPMDVVSP KNESFGNIVS YLWDYGNGIT
SIDATPLPQT YYPTRKEQDY RIRLIVLDAQ NCLDTTDHVI KAVTSCYIDV PTAFSPNNDG
KNDFLYPLSA YKATDLDFSV YNRVGQLVFH STNWTQKWDG TVKGLPADIG TYVWMLRYTI
TDTGKKVFKK GTTVLLR
|
|---|
| |