Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2884 |
Symbol | |
ID | 8359045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3565658 |
End bp | 3566434 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644965064 |
Product | NUDIX hydrolase |
Protein accession | YP_003122564 |
Protein GI | 256421911 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.94634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAG AAGAAGAATT CAGGGATTTT ATACTAAACG GACACTTGTA TTACATTCCC CACGTTACTA TCGACTGTGC TATCTTTGGT TACCATGCAC AGCAACTCAA GCTGTTGCTT ATCAAACACA GAAACATCGA TAACTGGTCT TTGCCAGGGG GATATATTAA GCGTGCTGAG AAGTTGCTGG ACGCTGCCAA TCGCAATATA AAAGACCGTA CAGGCATTGA CAATCTGTTT TTGCAGCAAT TCAAGACTTT TGGCGATCCG GATCGCATTC AGTTTGACAA ATTCGATAAA AAGAAATGGC TGGAAGACAC CGGATTGCCA TCCTGGGAGG GCAACTGGCT TATTAATCAG ACGATTTCGG TTGGTTTTTA CGCTATTACT GATTTTTCAA AAACCAGACT ACAGACAGAC TTCATTACTG AGGCATGTGC CTGGTTTGAC ATTAATAATC TGCCACCGCT GGAATATGAT CATGACGAAA TGGTGCAGGA AGCGATGCAT ACCATGCGAC TGCATCTGTA TCACTATCCG ATCGGGCTCA ATATGCTGCC TGAAAAATTT ACTTTGAGCG AGATCCATGC TTTATATGAG ACATTATTGG GGAAAAAGCT GGACGTCAGT AACTTTCCAA AGAAACTGCT TGCGCTCAGA CTGCTAAAAA AACTGGATGA AAAAAGGAGC ATTGGCGCAC ACCGCTCGCC ACATTTATAT AGCTTTGATA AAGAAATGTA TGCGTTAGCT TTGAAAGAGG GACTGGTATT AAGTTAA
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Protein sequence | MQTEEEFRDF ILNGHLYYIP HVTIDCAIFG YHAQQLKLLL IKHRNIDNWS LPGGYIKRAE KLLDAANRNI KDRTGIDNLF LQQFKTFGDP DRIQFDKFDK KKWLEDTGLP SWEGNWLINQ TISVGFYAIT DFSKTRLQTD FITEACAWFD INNLPPLEYD HDEMVQEAMH TMRLHLYHYP IGLNMLPEKF TLSEIHALYE TLLGKKLDVS NFPKKLLALR LLKKLDEKRS IGAHRSPHLY SFDKEMYALA LKEGLVLS
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