Gene Cpin_2884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2884 
Symbol 
ID8359045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3565658 
End bp3566434 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content42% 
IMG OID644965064 
ProductNUDIX hydrolase 
Protein accessionYP_003122564 
Protein GI256421911 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.94634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAG AAGAAGAATT CAGGGATTTT ATACTAAACG GACACTTGTA TTACATTCCC 
CACGTTACTA TCGACTGTGC TATCTTTGGT TACCATGCAC AGCAACTCAA GCTGTTGCTT
ATCAAACACA GAAACATCGA TAACTGGTCT TTGCCAGGGG GATATATTAA GCGTGCTGAG
AAGTTGCTGG ACGCTGCCAA TCGCAATATA AAAGACCGTA CAGGCATTGA CAATCTGTTT
TTGCAGCAAT TCAAGACTTT TGGCGATCCG GATCGCATTC AGTTTGACAA ATTCGATAAA
AAGAAATGGC TGGAAGACAC CGGATTGCCA TCCTGGGAGG GCAACTGGCT TATTAATCAG
ACGATTTCGG TTGGTTTTTA CGCTATTACT GATTTTTCAA AAACCAGACT ACAGACAGAC
TTCATTACTG AGGCATGTGC CTGGTTTGAC ATTAATAATC TGCCACCGCT GGAATATGAT
CATGACGAAA TGGTGCAGGA AGCGATGCAT ACCATGCGAC TGCATCTGTA TCACTATCCG
ATCGGGCTCA ATATGCTGCC TGAAAAATTT ACTTTGAGCG AGATCCATGC TTTATATGAG
ACATTATTGG GGAAAAAGCT GGACGTCAGT AACTTTCCAA AGAAACTGCT TGCGCTCAGA
CTGCTAAAAA AACTGGATGA AAAAAGGAGC ATTGGCGCAC ACCGCTCGCC ACATTTATAT
AGCTTTGATA AAGAAATGTA TGCGTTAGCT TTGAAAGAGG GACTGGTATT AAGTTAA
 
Protein sequence
MQTEEEFRDF ILNGHLYYIP HVTIDCAIFG YHAQQLKLLL IKHRNIDNWS LPGGYIKRAE 
KLLDAANRNI KDRTGIDNLF LQQFKTFGDP DRIQFDKFDK KKWLEDTGLP SWEGNWLINQ
TISVGFYAIT DFSKTRLQTD FITEACAWFD INNLPPLEYD HDEMVQEAMH TMRLHLYHYP
IGLNMLPEKF TLSEIHALYE TLLGKKLDVS NFPKKLLALR LLKKLDEKRS IGAHRSPHLY
SFDKEMYALA LKEGLVLS