Gene Cpin_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2879 
Symbol 
ID8359040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3557450 
End bp3558388 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content43% 
IMG OID644965059 
Productcoagulation factor 5/8 type domain protein 
Protein accessionYP_003122559 
Protein GI256421906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAT CTTATATCAT CATATTATGC TGGCTGACAA TGCTATTAGC TGCCTGCTCT 
AAAGAAAAAG GCATTGAAGC ATTACCAGAT AACAGCGTTG CTTTCGATTT AAAGGCAGGA
GAAGATACCG TGGTGATGCC GCTGTCTATT CAGGCTGACT CTATTATCAC CGTCAATTTC
AAGGCGATTT TATCAGGCTC CCCCTCTTCT ACTGATCATT GGGTGAATTT TGCAGTGGAC
ACATCCAAGA TGAGTGCGTA CCGCCTGAAA TACGGAGCCG CATTAGCGCT TCCATCTAAT
TCTTATCTTT TTTATAAATC ACAGACCCGT TTAACAGCCG GTTCATCCAC TTCTGAGCCA
ACGCAGTTAA ATATAGTCAT GCAAACCAAG CTGACCGAAT ACACTACTTA TGTACTGCCC
ATTGTGATTC AGTCAGTAGA CGGAAAACTG GAAGGACCCG CCAAAACGGA AGTATTGTAT
TACGTATTTA AGACAGGCGC CCCCCTGGTT ATCAGCAAGA CAGGTTGGAC AATCGCCGGA
GTGTCCTCGA TTTTCGGCTC TTTTGTAGCC CCGAATGTGA TAGATGACAA CAAAACAGGC
ACTTACTGGA CCAGTAACAT TACGCAATCT ATGCCACAAT GGATAAGTAT TAATTTTAAC
AGGGATATTA CTTTTTCCAC TGTGAGTTAT TCGGTCCCAA CCTTACTGAA CTACCCTGCT
CAGGGTGGCT ATCCAACTTC TATGCAGATT GAAACCAGCA TGGATGGGAA CACATGGGTG
GACAAAGGAA CATTTGCCGG TGACATTAAT AATAATACGC AGGCGATCAA CATAGGAACA
ACCAAAGCCA GATATCTACG TTTTACATCA TTAGCGTCCG TTAAATATGC AGGCGTTTAT
TCCGCCATAT TCATCAGTGA TATATCCCTG GTACCTTAA
 
Protein sequence
MSKSYIIILC WLTMLLAACS KEKGIEALPD NSVAFDLKAG EDTVVMPLSI QADSIITVNF 
KAILSGSPSS TDHWVNFAVD TSKMSAYRLK YGAALALPSN SYLFYKSQTR LTAGSSTSEP
TQLNIVMQTK LTEYTTYVLP IVIQSVDGKL EGPAKTEVLY YVFKTGAPLV ISKTGWTIAG
VSSIFGSFVA PNVIDDNKTG TYWTSNITQS MPQWISINFN RDITFSTVSY SVPTLLNYPA
QGGYPTSMQI ETSMDGNTWV DKGTFAGDIN NNTQAINIGT TKARYLRFTS LASVKYAGVY
SAIFISDISL VP