Gene Cpin_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2873 
Symbol 
ID8359034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3551312 
End bp3552202 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content46% 
IMG OID644965053 
ProductKetopantoate reductase ApbA/PanE domain protein 
Protein accessionYP_003122553 
Protein GI256421900 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.393919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGTC GTGGGGTTAT CTCCGCGCAA TATGCTTATG TCCTGGAAAA AGCAGGACAT 
ACCGTTGAAT TTTATGTAAG ACCAGGGAAG AAAGCAGCGG CGATTCCTTT GGATATCTAT
GACAGGGGAA AACATATTCA GACCACCTGG CGGGTGACCA TGCGGGAGGA TTTACCACCG
GATCATGATT ATGACCTGAT CGTTGTAAGT GTACAACACT ATCAATTTAA GAATGTAGCT
GCATTCTTAT CAGGTAAAGC AGGCAATGCA ACAATACTCA TTTTCAATAA CTTCTGGAAC
GATCCCATGA CGGAAGCAGC CGCATTACCC AAAGACCAGC TGGCCTGGGG CTTCCCTATG
GCAGCAGGTG GTGTTGATCA GCGGGGGGTG TTGAAAGGGG CATTGTTTGG TCGTGTTCAC
TTTGGCACCT TTGGTACAGC ACCTACAGCA CGGGAAATTG CCGTTCGCCA GCTGTTTAAA
TCAAGCGGAT TTAAGATCCT GGAACACAAG GATTTTAAAA CATGGTTATC CATTCACTTC
CTGGTGAATG CCGGTTTACT TTCACAAGCG CTGCGTGCAG GTTCTTTAGG ACTGTTGTTA
TCCTCAAAGG AGCATGGTCA GCAGGTGGTA CTGAATGTGC GGGAATTGTT TCCTGTATTA
CAACAGCGGG GTATAAAGGT ACAGGGGGAA GCAGCGCTTT TCAAACTACC ACCATCGCTG
GTAAGTTTAT TAATGAGAAC AGTGATGAAG TTAAATCCTG CTTTTAGACA TTCATTGCTG
AATCATTCCA ATCCGGAAGA AGTGAAGTCT TTTTGCCGGG ATGTATTAGC AGAAGCAAAA
AGCAAGGGCA TTGCTGTACC CAGACTGGAA TCAGTAGCCA GCTATCTGTA A
 
Protein sequence
MFGRGVISAQ YAYVLEKAGH TVEFYVRPGK KAAAIPLDIY DRGKHIQTTW RVTMREDLPP 
DHDYDLIVVS VQHYQFKNVA AFLSGKAGNA TILIFNNFWN DPMTEAAALP KDQLAWGFPM
AAGGVDQRGV LKGALFGRVH FGTFGTAPTA REIAVRQLFK SSGFKILEHK DFKTWLSIHF
LVNAGLLSQA LRAGSLGLLL SSKEHGQQVV LNVRELFPVL QQRGIKVQGE AALFKLPPSL
VSLLMRTVMK LNPAFRHSLL NHSNPEEVKS FCRDVLAEAK SKGIAVPRLE SVASYL