| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2866 |
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| Symbol | |
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| ID | 8359027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3546304 |
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| End bp | 3547767 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965046 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003122546 |
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| Protein GI | 256421893 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.141314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAA CTGAGCAAAA TTCCACCAGA TTATTGCTTT ATGCATTTGT ACTTAGTATG
TGTATCGGTG CCTGTTCACA TGATAACAAT CTGCATCGTC CGTCTGCGCT TGCCGTTGCG
GATCCCAATG CCAGTCCTGT AGTTTTAGCC GCACTTGATC TTATGAGCGG AAATCCTGTT
TTACCGGTTC CTACAGCCGA TCCGGATATC ATTTATGCCA ATGGCAAGTA TTACGTCTAT
ACCACCGCTA TCGGGCCTAA TAACAGCCAA TTTCACGCTT ATTCGTCCAC TGACCTGCTA
AGCTGGAATG ATGAGGGCGT CGTATTGGAT TTAAACAACG TCAGCTGGGC GCATACGGGG
GGATGGGCGC CGTCCGTGGT AGCACGTAAT GGCAATTTCT ATATGTACTT TACGGCAGCC
AAGAAAATAG GGGTTGCAGT GAGTACGAGT CCGACAGGGC CTTTTATTGA CCGGGGTAGT
GCACTGGCTA CCGGAGACGG AACGGATCCT ATTGATCCGA TGGCCTTTAT TGACACAGAT
GGACAGGCGT ATCTTTATTG GGGTAATACG ACATTGAATA TGCAACGTCT GAATACTGAT
ATGATATCAC TGACTGGTAC CCGCAGTCAT GATAAACCAT CTAATTATTT CGAAGCGCCT
TATATGTTGA AACGAAATGG TATTTATTAC TTCATGTATT CCATTAACGA TTACAGGAAT
GACGACTACC ATGTGGAATA TGCCACTTCC AGCGGTCCTA TGGGACCATG GACTTATAAA
GGGCGTATTA CATCTCCACT GGGCCCTGTT AAAGGCCCGG GTCATAATGC AGTGATCCGC
AAGGCTGGTT GTAGTGATGA ATATTATTTT GTCTATCATC GGCGGACAAG TACCAATGTG
GACGAAAGAC AGGTGGCTAT TGACAGACTA TTTTTTGATG GTGCAGGAAA TATACTGCCG
GTAAATATTA CCAACTCCGG TGTAGTCGGA TACGATGGTA TCTGTTATAC GCCTAATCCT
GTTCCTGATG GACAATACGT TATCAGATCC AGGGTCAATA CGACCGCAGG AGCCGGTCTG
TATCTTGATA TTCCGGGATG CGCCACTGGG AATGCGGACG TAAGAACCTG GACAAGAACC
AATTGTGATG GTCAGAAATG GACATTTACC TATCAGAACA ATGGTTATTA TAAGATCATC
TCAGCGTTGC CCAATCACAA AGCTTTAGAC CTGAATGCCT GTGGACTTGA CAGAGGGGCG
AATATTCAGG TATGGGATGT GTTGTCAAAT GATTGCCAGT TGTGGCGGAT TGAAACAGCC
GGTAACGGAT ATTATCGGAT TATGGCAAAA GGAAGTAATA ATGTGATGGA CTTGGCGGAT
GGTGATCCTA CGCCGGGCGC AGATGTAAGG TCATGGACCT GGAATGGCGC TGATGCACAG
TTGTGGAAAC TGGAGACACC ATAA
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| Protein sequence | MRKTEQNSTR LLLYAFVLSM CIGACSHDNN LHRPSALAVA DPNASPVVLA ALDLMSGNPV
LPVPTADPDI IYANGKYYVY TTAIGPNNSQ FHAYSSTDLL SWNDEGVVLD LNNVSWAHTG
GWAPSVVARN GNFYMYFTAA KKIGVAVSTS PTGPFIDRGS ALATGDGTDP IDPMAFIDTD
GQAYLYWGNT TLNMQRLNTD MISLTGTRSH DKPSNYFEAP YMLKRNGIYY FMYSINDYRN
DDYHVEYATS SGPMGPWTYK GRITSPLGPV KGPGHNAVIR KAGCSDEYYF VYHRRTSTNV
DERQVAIDRL FFDGAGNILP VNITNSGVVG YDGICYTPNP VPDGQYVIRS RVNTTAGAGL
YLDIPGCATG NADVRTWTRT NCDGQKWTFT YQNNGYYKII SALPNHKALD LNACGLDRGA
NIQVWDVLSN DCQLWRIETA GNGYYRIMAK GSNNVMDLAD GDPTPGADVR SWTWNGADAQ
LWKLETP
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