| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2858 |
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| Symbol | |
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| ID | 8359019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3534140 |
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| End bp | 3536080 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965038 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003122538 |
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| Protein GI | 256421885 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00145898 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCT CTAAAACAAG CGCAAACAAT ATGAAATCAT TATATAAATA TTTATGCCTG
ATCGGTTTGT TGCTGTCCGG CAACGGCTGT AAAAAATACC TGGATGTGGT ACCGCCTGAT
GTGGGTACGC TGGATTATGC ATTCAGAAGC AGAAATGAAG CGGAAAATTA TCTCTTTGCC
TGTTATAATG CGATACAGAA TCTCAATGAC CTTAACAGAA GCCCTGGCTT CACCATGTCT
TCAGAGATCA TCTTTCCAAT GAATCTGCCT GGCAATCCGA TTGATATAAC CGGGTTTGCA
TTGATTACCG GTACACAGAA CGCAGGTAAT CCGGGATTAA ACTACTGGGA TGGTAGCGGT
AACGGTATCG CTATGTATAA GGCCATCCGG AAATGTAATA CCATGCTGGA GAATATTGAT
AAACCGGCGG ATCTGCCAGC TGAAGAGAAA ATCAGATGGA TTGCGGAGAC CAAATTCTTA
AAAGCATATT ACCACTACTA CCTGTTGCGT CTCTATGGCC CTATACCGAT AGTAGATAAA
AATCTGCCGG TAGAGGCCAG TCCGGAGGAA GTGAAAGTGA AACGGCAGCC GGTTGATGTA
GTCGTGAATT ACATCACAGC ACTGCTGGAT GAAGCAATAC CAGATTTACC TGCCACCATC
GATAACCCTG CCAAGGAGTT AGGCAGAGTG ACGAAAGCAG CGGCAATGGC CATTAAAGCA
GAAATGCTGA TGACGGCCGC CAGTCCTTTG TTCAATGGAA ATCCTGACTA TTCCAATTTT
AAAGACCAAG AAGGGACCGC ACTTTTCTCC CCTTATGATG CTGCTAAATG GCAAAAAGCA
GCTGCCGCAT GTAAAGCAGC GATCGATGTA TGCGAAGGTG TAGGCTTACG GCTGAATAAC
ACCTTTATAC CCGCACCTGG TGTCGGTAAC CTACCGGACA AGATCAGGCA GGAACTTGTT
TTCCAGACCT CGCTGACGCA ACGCTGGGAT ATCAATACAG AACTGATCTG GTCTTTAAAT
GCGATATGGC ACGGACAGGA GTATTGCATA CCCCGTATGA CGCAGCGTGC GAACCAGAAT
GACAATGATA ACCCAGCCTA CTTTGCGGTG CCTATCTCCA CGACTGATCT GTTTTATACT
AATAATGGCG TGCCGATAGA ACAGGATAAA AACTGGGATT ACGGTGGCCG TAATCAGTTA
CAGATGGGAG ATGCTGAAAA TGCACCCTAC ATTAAACAGG GTTATACGAC CATTAAAGCC
CATTTTAACC GGGAGACAAG GTTCTATGCC AGCATCGGGT TTGATGGCGG TATATGGTTT
GGAAATGGCA TCCTGGATGG CGCTAACCCG CATTATGTGG AAGCACGCGG ACAATCCTCA
CTTGCTGGTC CGAAGACATT ACAGAAAACC AATATCACCG GTTACTGGCC TAAAAAGCTG
GCCAACTATC TCACCGTATA TGATAACGGG TTTAACTGGA CGGACTTCTC TATGCCGGTA
ATGCGTATGT CAGGTCTTTA TCTGCTGTAT GCGGAAGCGC TTAACGAAGT AAACGGACCG
ACGGCAGAGG CTTTGTCCTA TGTTGACAGG GTAAGGGAAC GTGCCGGCCT GCTGGGTGTA
ACAGATGCCT GGACCCGGTA TGCAAAAGAT CCTAACAAAC CAAACAGCAA AGACGGTTTA
AGAGATATCA TCCACCAGGA ACGCCGTATC GAACTCTGTT TTGAAGGTCA GAGCGGATGG
GACCTGAGAA GATGGAAAGA GTTGCAGATG GTATTAAGCG CTCCCCTGAA AGGATGGAGT
GTCTATGAAG ACCAGGCCAT CAACTATTAC CGGGCGAAGA ACGTGGAGAT ACCTGTGTTT
GGTACCCGCG ACTACCTGTG GCCGATATCA ACAAACAGCC TTGTTGTAAA CAGCAATCTC
GTTCAGAATC CGGCCTGGTA A
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| Protein sequence | MSTSKTSANN MKSLYKYLCL IGLLLSGNGC KKYLDVVPPD VGTLDYAFRS RNEAENYLFA
CYNAIQNLND LNRSPGFTMS SEIIFPMNLP GNPIDITGFA LITGTQNAGN PGLNYWDGSG
NGIAMYKAIR KCNTMLENID KPADLPAEEK IRWIAETKFL KAYYHYYLLR LYGPIPIVDK
NLPVEASPEE VKVKRQPVDV VVNYITALLD EAIPDLPATI DNPAKELGRV TKAAAMAIKA
EMLMTAASPL FNGNPDYSNF KDQEGTALFS PYDAAKWQKA AAACKAAIDV CEGVGLRLNN
TFIPAPGVGN LPDKIRQELV FQTSLTQRWD INTELIWSLN AIWHGQEYCI PRMTQRANQN
DNDNPAYFAV PISTTDLFYT NNGVPIEQDK NWDYGGRNQL QMGDAENAPY IKQGYTTIKA
HFNRETRFYA SIGFDGGIWF GNGILDGANP HYVEARGQSS LAGPKTLQKT NITGYWPKKL
ANYLTVYDNG FNWTDFSMPV MRMSGLYLLY AEALNEVNGP TAEALSYVDR VRERAGLLGV
TDAWTRYAKD PNKPNSKDGL RDIIHQERRI ELCFEGQSGW DLRRWKELQM VLSAPLKGWS
VYEDQAINYY RAKNVEIPVF GTRDYLWPIS TNSLVVNSNL VQNPAW
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