Gene Cpin_2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2846 
Symbol 
ID8359007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3510734 
End bp3512197 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content49% 
IMG OID644965026 
ProductRagB/SusD domain protein 
Protein accessionYP_003122526 
Protein GI256421873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000771194 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGT TTATCATACT GTCTTTAATA ATCGTCGCTA TACTGACTCA AACTGCCTGT 
GAGAAAGCGT TGGATGTTAC GCCTCCGGGA GAGTTCGCAC CTGGAAATGT ATTGACGACA
GAGAAAGGAA TCAGATCCGT TTTGTTTTCT TCTTATGCAG GTATTCAAAA TCCAACACCC
ACCCGCTATC TGATCAACAA TGCGGAAGTA ACCACTGATG TCGGCTATAA TACCGGTGGT
GCGGAAAACC TCACACTGGT GCAGCTGATC AACTTTACAT GGGATGCTTC GCTGGGTACT
TTGCAGGCAG ACGTATGGGC GCCTACTTAC CGTACAATCC GCGATGCGAA TATTGTACTG
GAAAATATCG GCAACGTAAA TGCGCCGGAT GCCAGCAAAA AAGGCTATGC GGCAGAAGCC
AGGTTCCTGC GGGCATATGG CTACTATCTG CTGTATATCT GGTTTGGCCC GGTGCCGCTG
CGTACATCCA GTACTGCTGA AGCAACACTG GCAAGGGCAA CGGACGAACA GATGAAGTCT
TTTATAGAGA CGGAGCTGGC AGCAGCCATT ACTGATCTGC CGGATCCCGG TAAGGAGGAA
GCGTTTGCCA GGGCTAATAA GGGCGCTGCC TGGAGTGTGC TGGCCAAGTT CTATCTCAAT
ACCCGTCAAT GGCAGAAGGC AGCGGATGCT TGTCAGCAGG TCACAAATTT CGGGTATTAC
CAGTTGTTCC CTACTTATCA GAACCTGTTC ACCGTAGAAA ATGAAGGTAA CAAGGAAATG
ATTATGGTAC ATCCCTGCCG GAATCAGGAT GGCTTTGGTA ACTGGTATTC AGCAGGTGCT
TTACCGCCTG GTTTCAAAAC ATCCGCTCAG GTGCCTTCGT TTGTCTGGAC AGCTTCTATG
GCCAATTTTG CCACACAATA CAGAATGCGC TCCGCATTTA CCAATACATT TGATACCATC
AATGACCAGC GATCCATTCT CCTGTTGCGT CACTATGTAA ATACCTCGAA TGCCTGGGTG
AACCTGCTCT CCACACCGGA TAATGTGAGA AGTCTGAAAT ACTGGGATAA TGCCACTGTC
GGAAACCATA GCGGCAACGA CGTGCCTATT ATCCGCTATG CCGACATATT ACTGAGCCGT
GCAGAGGCAT TGAATGAGGT GAATGGTCCT ACACAGGAAG CGCTGGATCT GATCAACCAG
GTCAGGAAAA GAGCGGGTAT CGGCAATCTG ACGATGGCGG ATGCTACAGG TAAAGAAGTA
CTGAGAGACC TGATCCTGCG GGAGAGAGCA TGGGAGTTTT ATAGTGAAGG TCTGAGAAGA
GAAGACCTGC TGCGTCATGA TAAATTCATT TCACTGGCGA AAGCAAGAGG GATTACTGCT
GCCGCTGACA AGCATAAATT ATTCCCGATA CCCCAGACGG AAATTGATGC GAATCCGGCA
TGTAAGCAAA ACCCGGATTA TTGA
 
Protein sequence
MQKFIILSLI IVAILTQTAC EKALDVTPPG EFAPGNVLTT EKGIRSVLFS SYAGIQNPTP 
TRYLINNAEV TTDVGYNTGG AENLTLVQLI NFTWDASLGT LQADVWAPTY RTIRDANIVL
ENIGNVNAPD ASKKGYAAEA RFLRAYGYYL LYIWFGPVPL RTSSTAEATL ARATDEQMKS
FIETELAAAI TDLPDPGKEE AFARANKGAA WSVLAKFYLN TRQWQKAADA CQQVTNFGYY
QLFPTYQNLF TVENEGNKEM IMVHPCRNQD GFGNWYSAGA LPPGFKTSAQ VPSFVWTASM
ANFATQYRMR SAFTNTFDTI NDQRSILLLR HYVNTSNAWV NLLSTPDNVR SLKYWDNATV
GNHSGNDVPI IRYADILLSR AEALNEVNGP TQEALDLINQ VRKRAGIGNL TMADATGKEV
LRDLILRERA WEFYSEGLRR EDLLRHDKFI SLAKARGITA AADKHKLFPI PQTEIDANPA
CKQNPDY