Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2846 |
Symbol | |
ID | 8359007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3510734 |
End bp | 3512197 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644965026 |
Product | RagB/SusD domain protein |
Protein accession | YP_003122526 |
Protein GI | 256421873 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000771194 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGT TTATCATACT GTCTTTAATA ATCGTCGCTA TACTGACTCA AACTGCCTGT GAGAAAGCGT TGGATGTTAC GCCTCCGGGA GAGTTCGCAC CTGGAAATGT ATTGACGACA GAGAAAGGAA TCAGATCCGT TTTGTTTTCT TCTTATGCAG GTATTCAAAA TCCAACACCC ACCCGCTATC TGATCAACAA TGCGGAAGTA ACCACTGATG TCGGCTATAA TACCGGTGGT GCGGAAAACC TCACACTGGT GCAGCTGATC AACTTTACAT GGGATGCTTC GCTGGGTACT TTGCAGGCAG ACGTATGGGC GCCTACTTAC CGTACAATCC GCGATGCGAA TATTGTACTG GAAAATATCG GCAACGTAAA TGCGCCGGAT GCCAGCAAAA AAGGCTATGC GGCAGAAGCC AGGTTCCTGC GGGCATATGG CTACTATCTG CTGTATATCT GGTTTGGCCC GGTGCCGCTG CGTACATCCA GTACTGCTGA AGCAACACTG GCAAGGGCAA CGGACGAACA GATGAAGTCT TTTATAGAGA CGGAGCTGGC AGCAGCCATT ACTGATCTGC CGGATCCCGG TAAGGAGGAA GCGTTTGCCA GGGCTAATAA GGGCGCTGCC TGGAGTGTGC TGGCCAAGTT CTATCTCAAT ACCCGTCAAT GGCAGAAGGC AGCGGATGCT TGTCAGCAGG TCACAAATTT CGGGTATTAC CAGTTGTTCC CTACTTATCA GAACCTGTTC ACCGTAGAAA ATGAAGGTAA CAAGGAAATG ATTATGGTAC ATCCCTGCCG GAATCAGGAT GGCTTTGGTA ACTGGTATTC AGCAGGTGCT TTACCGCCTG GTTTCAAAAC ATCCGCTCAG GTGCCTTCGT TTGTCTGGAC AGCTTCTATG GCCAATTTTG CCACACAATA CAGAATGCGC TCCGCATTTA CCAATACATT TGATACCATC AATGACCAGC GATCCATTCT CCTGTTGCGT CACTATGTAA ATACCTCGAA TGCCTGGGTG AACCTGCTCT CCACACCGGA TAATGTGAGA AGTCTGAAAT ACTGGGATAA TGCCACTGTC GGAAACCATA GCGGCAACGA CGTGCCTATT ATCCGCTATG CCGACATATT ACTGAGCCGT GCAGAGGCAT TGAATGAGGT GAATGGTCCT ACACAGGAAG CGCTGGATCT GATCAACCAG GTCAGGAAAA GAGCGGGTAT CGGCAATCTG ACGATGGCGG ATGCTACAGG TAAAGAAGTA CTGAGAGACC TGATCCTGCG GGAGAGAGCA TGGGAGTTTT ATAGTGAAGG TCTGAGAAGA GAAGACCTGC TGCGTCATGA TAAATTCATT TCACTGGCGA AAGCAAGAGG GATTACTGCT GCCGCTGACA AGCATAAATT ATTCCCGATA CCCCAGACGG AAATTGATGC GAATCCGGCA TGTAAGCAAA ACCCGGATTA TTGA
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Protein sequence | MQKFIILSLI IVAILTQTAC EKALDVTPPG EFAPGNVLTT EKGIRSVLFS SYAGIQNPTP TRYLINNAEV TTDVGYNTGG AENLTLVQLI NFTWDASLGT LQADVWAPTY RTIRDANIVL ENIGNVNAPD ASKKGYAAEA RFLRAYGYYL LYIWFGPVPL RTSSTAEATL ARATDEQMKS FIETELAAAI TDLPDPGKEE AFARANKGAA WSVLAKFYLN TRQWQKAADA CQQVTNFGYY QLFPTYQNLF TVENEGNKEM IMVHPCRNQD GFGNWYSAGA LPPGFKTSAQ VPSFVWTASM ANFATQYRMR SAFTNTFDTI NDQRSILLLR HYVNTSNAWV NLLSTPDNVR SLKYWDNATV GNHSGNDVPI IRYADILLSR AEALNEVNGP TQEALDLINQ VRKRAGIGNL TMADATGKEV LRDLILRERA WEFYSEGLRR EDLLRHDKFI SLAKARGITA AADKHKLFPI PQTEIDANPA CKQNPDY
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