| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2845 |
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| Symbol | |
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| ID | 8359006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3507646 |
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| End bp | 3510723 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965025 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003122525 |
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| Protein GI | 256421872 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.346257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAA TTCCAACACT TGCTGCACGT TTGCTGCTGA TCAAATTGCT ATTATTTTTT
GGGTTGCTGG CGAATGCCCA GAACCGAATT GTCAGGGGGA AGGTTACGTC AGCCGACAAA
GGGACGACAC TGGCCAACGT AACCGTATTA TTAAAAGGGG GGAATACCAG AACCACCACT
GATGCCAACG GTAACTTTTC GATCCAGGTA CAGGACAATA AGGCCGTATT ATTATTCTAT
TTAGTGGATT ATGCCACCCG GGAAGTGCCT GTAGCTGACA ATAGCACTCT GGAGGTCGCC
CTGGAATTAA AGAACGAGAA CCTGGGCGAA GTGGTCGTTG TCGGATATGG AACAGTGAAA
AAGTCGGATG TGACGGGCGC CGTCGTATCC CTGAAATCAA AAGATCTTAC ACCAGGCGCC
AATATCAACG TCGAGCAGAC ATTAATGGGA CGTGCTTCCG GCGTACAGGT ATACCAGAAA
AGCGGGGAAC CTGGCAGTGC CATGAGCGTG AAGATCCGTG GCGCGAGTTC GATTACTGCC
GGAAATGACC CTTTATATGT CATTGACGGG ATGCCGGTGA ATAACCTTTC TCCGGTAACA
GGTAGCGGTG CCGGCTTTGT AGCTACGCCC AATCCCCGTA ATCCGTTGAA TAGTCTGAAC
CCGGCAGATA TTGAGTCAGT CGAAATACTA AAGGACGCTT CTGCGACCGC TATTTACGGT
TCCCGTGGTT CCAATGGGGT AGTCATGATT ACCACTAAAA AAGGGAAGAG CGGCAGGCTA
AGCGTTAACT ACAGCACCTA TTATGGTGTA CAGAAAGCAT CCAATTCACT GGAAATGCTG
ACCGGTCAGC AATATAAAGA CGTACTAAAC GCCATTATTG ACGACGGCGG CGGGGTTGCC
TCCGAAAGGG TGACCAATGA CCCGGTAAAT GTAGACTGGC AAAAGGAGCT ATACCGCTCC
GCCAATGTAC AGAGCCATGA CCTTTCTTTA TCCGGCGGAA AGGACAATAC GCGTTTCTAT
GCCTCACTGG GTTATTTCAA CCAGGAAGGC GTATTGCAGA ATTCTTCTGT AAAAAGATAT
ACTGCGCGGT TGAACCTCGA AAATAGCGTG GCACAGAAGT ATGCATTTGG GGTCAGCTTC
AATACCTCTT ATATACGGGA TAACTTCAAC TCTGTAGGGA TCGGTGTAAA TGAAAACGCC
AGTGCCTTAT ATGCTGCGAT CAACTACGAT CCCAGCTATC CGATATTCAA TACGGATGGT
AGCTATAACC GCTCACCGTT CATGACTACC ATCGATCACC CGCTGATTCT TGCAAATGGA
CAATATGCTA ATAGTGACGG GTTCCGGACC TTCGGTACTG TGTATGGCGA GTACTTTTTC
GTGCCAGGCT TTTCGCTTAA AATAAAAGGA TCCGGGGATG TGAATATTAC CCAGCGTAAT
ACCTGGCTGG ACCCATCCAC GATATTGGGT GCACCCACAG GCGGTATCGC TTCCATTAAT
ACCGGTAACG TGAACTATTA CATGGGAGAG GCTACGCTGA ATTATAAAAA GGAATTTGGT
CAGGATCATG TTATCAATGC AGTAGCAGGC GCTACCTCTG AACATTTCGG ATCCAATTCC
TTTGGTGGTA ACGGTCGTGG ATATGCATTA CCCGATCTTA CCTATAATGC CATCGGTACC
GGCAACAGTA CCCTGAACCA GATTGGTAGC GGCCGTGCAT CTACAAAAAT CATTTCCTTC
CTGGGAAGGG TGAACTATAG TTACAAAGAT CGTTACCTGC TGACTGCCAG CTTCAGGGCA
GATGGATCGT CCAGGTTCGG CGTTAATAAC CGTTTTGGCT ATTTCCCTTC TGTCGCACTG
GGCTGGAAAA TGCATGAAGA GTCTTTCCTG AAAGGTGTCA GCTTTATCGA TGAACTGAAA
TTCAGAGTCA GCTATGGTGT GATCGGTAAC CAGTCGATCG CCAATTATCT TTATATCACC
ACCTTCTCCG GCGGAGGAGA TGCCGTATTT GGCGGAAACC GTTATACCTC CCTGGCGCCT
TCCCGTGTAG CCAACCCGGA CCTGAAATGG GAAGCGGCTA AACAGGCGGA TATCGGTATC
GACTTTGCAC TCTTCGATAG CCGGCTTACC GGTTCACTTG AATATTATGA ACGACGTACT
TCAGACCTGC TACTCGATCT GCCACAACCT TTGAGTACTG GTTTTGCTGT AAAAACGCAG
AATATCGGTC GTATGAAAAA TACCGGTATT GACCTGCATA TTGCCGCCGA TGTGCTTCGC
AGTAAACAAG GCTTCAACTG GAACATCGGT ACTGTACTCT CTACTGTAAA GAACCGGGTG
TTAAGTCTCG GACCGCTGAA ACAGATCATC ACCGGTGGCG CAGGTTTCAT TACCAATGCC
AGTATTATCA AACCCGGCGA ATCCCTGGGG TCTTACTATG GATATGAAGT ACTGGGCGTA
TGGCAGACGC ATGATGATTT CTCTAACGCG CCAACCGGTG TGAAACCAGG TGATCTGAAG
TTCAGGGATC TGGATAATAA CAAACAGATC AATGCAGACG ACCGTGTTAT TCTTGGTAAG
TCACTGCCTG ATTTTACCTA TGGTATTACC AATACTTTCG GCTTCAGACG TGTATCACTC
TCTGTATTCC TGGAAGGTTC AAAAGGCGGT AGTGTATTGA ACAATGCAGC TATTGACAGT
TATTTTCCTA TCAGCTTCAG AAGGAATAAA CTGGCAAAAC CTTACCTGAA CCGCTGGACA
CCGGAGAACC CGACAAATGA ATATCCTTCA TTTGTCAACC CTACATCACA GGGACAACAA
ACAGTGAATT CAAGAACCGT AGAAGATGCT TCTTACCTGC GGCTGCAATC TGTAAGGCTC
AGCTACGATT TCAATTTGCA TAATAAAGTA ATAAAAGGGC TCCAGGCTTA TGTGACCGGC
CAGAATCTGT TCACCATCAC CAAATACTCG GGCATTGATC CTGCTGTGAA TTCCATCGGT
GATGATATCC TGAAAATAGA CTATAGCTCT TACCCGATGA CACGCAGCTT TTTATTCGGG
TTAAATGTTC AATTCTAA
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| Protein sequence | MKRIPTLAAR LLLIKLLLFF GLLANAQNRI VRGKVTSADK GTTLANVTVL LKGGNTRTTT
DANGNFSIQV QDNKAVLLFY LVDYATREVP VADNSTLEVA LELKNENLGE VVVVGYGTVK
KSDVTGAVVS LKSKDLTPGA NINVEQTLMG RASGVQVYQK SGEPGSAMSV KIRGASSITA
GNDPLYVIDG MPVNNLSPVT GSGAGFVATP NPRNPLNSLN PADIESVEIL KDASATAIYG
SRGSNGVVMI TTKKGKSGRL SVNYSTYYGV QKASNSLEML TGQQYKDVLN AIIDDGGGVA
SERVTNDPVN VDWQKELYRS ANVQSHDLSL SGGKDNTRFY ASLGYFNQEG VLQNSSVKRY
TARLNLENSV AQKYAFGVSF NTSYIRDNFN SVGIGVNENA SALYAAINYD PSYPIFNTDG
SYNRSPFMTT IDHPLILANG QYANSDGFRT FGTVYGEYFF VPGFSLKIKG SGDVNITQRN
TWLDPSTILG APTGGIASIN TGNVNYYMGE ATLNYKKEFG QDHVINAVAG ATSEHFGSNS
FGGNGRGYAL PDLTYNAIGT GNSTLNQIGS GRASTKIISF LGRVNYSYKD RYLLTASFRA
DGSSRFGVNN RFGYFPSVAL GWKMHEESFL KGVSFIDELK FRVSYGVIGN QSIANYLYIT
TFSGGGDAVF GGNRYTSLAP SRVANPDLKW EAAKQADIGI DFALFDSRLT GSLEYYERRT
SDLLLDLPQP LSTGFAVKTQ NIGRMKNTGI DLHIAADVLR SKQGFNWNIG TVLSTVKNRV
LSLGPLKQII TGGAGFITNA SIIKPGESLG SYYGYEVLGV WQTHDDFSNA PTGVKPGDLK
FRDLDNNKQI NADDRVILGK SLPDFTYGIT NTFGFRRVSL SVFLEGSKGG SVLNNAAIDS
YFPISFRRNK LAKPYLNRWT PENPTNEYPS FVNPTSQGQQ TVNSRTVEDA SYLRLQSVRL
SYDFNLHNKV IKGLQAYVTG QNLFTITKYS GIDPAVNSIG DDILKIDYSS YPMTRSFLFG
LNVQF
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