| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2844 |
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| Symbol | |
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| ID | 8359005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3504596 |
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| End bp | 3506944 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965024 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003122524 |
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| Protein GI | 256421871 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.350592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAAT TTTTTCAGAT TTTCCTCTTA TTGTTACCTT TCTACTGTTT GGCGTCTGTG
AATGAAGAGA ATGATTTTGG TACCATTAAA GGCAAAATAA CAACCAACGA CAACCGCCCT
GCATCCGCGG TAACCATTAT GATAAGAGGT GCAAAAAAGA CAACACTTAC AAACGAGGAT
GGTACATTTA CCATTTCGCA TGTTCCGACA GGCACTCACC AGCTGGAAGT ATCCCTGGTT
GGTTATGCCC CTTTACAGGA GGAAGTAAGT GTGGAAAAAG GAAAGGTGAC AGAGATCGCG
CTGCAATTGC AGGTATCCAG TACACAGTTG AAGGAAATAT CCATCACTTC CAATCAGAAT
AAATTCAGTC GCAGGGAAAG CGAGCAGATC GCCCGTCTCC CCATTAAAAA TCTGGAAAAC
CCACAGGTAT ATTCAGTAGC GGGAAAAGAA CTGATCGAAG AACAGGTGAT CACCGAGAGA
ACTGACCTCT ACCGTAACAT CCCCGGGGCA GTACCCAATT TCGCCGCCGG TGGTTCCCAG
GGTATGACCA TCCGTGGTTT TTCAAATGGC ATGGGTATGC GTAACGGCAT GGTTACCAGC
GCCATCGTTC CACTGAACCC GATCATTCTG GAAAAAGTGG AGGTGATCAA AGGCCCCTCC
GGTACTTTGT TTGGCAGTAA CCGTAATACC ACCTTTGGCG GCGTATTTAA TTATGTCACC
AAAAGACCTT ATGACACCTT CGGTGGTGAA GTCAGCCTTA CAGGTGGCAG TTTCCAGTTT
GGCCGTATCA CCGCAGACAT CAATACACCC CTTAATAAGG AAAAGACACT CCTGTTCCGC
CTGAACGCAG GCGCCCAAAC AGAAGGTTCT TTCCAGGACC AGGGCTATGC TAAAAACTAT
ACCATTGCGC CTACCATTAC CTATCAGCTG ACCGACCGTC TGAAATTAAC GCTGGATGTG
GAGCTGACCA GGGCTTCTTA TACCACTACC TCCTTTGGTA TAGACTCTAT GAGCAAAGTG
ACGGCCCGTA ACTTTAAAGA CCTGCCGATC GGCTACAAAC GCTCTTATAT TAATAACAGC
GTAGATGTAT CCAACGGTAT CAATAATATC CAGGCGCAGG CAGAATACAA GATTTCCGAC
AACTGGACTT CCCAGACCAA CTACCTGTAT TCCGAGGGCT TTTACAAACA CCTGCTCTGG
ACGACACTGT CACTGGTAAG TGATTCCATA ATGGCCCGTA CCGTCAGGAA CCAGACGCCG
GAGACATTTG GCAATATCCA GCTGCAACAG AACTTTATCG GTGATTTCTA CATTGGTTCC
TTCAGGAACA GGATGGTCAT CGGACTGGAC TACAACTATA ACTACAATCA GTTGTACCGC
GCCACCGTAT CATATGATAA GGTAAACATC AACAATCCGT TACCGGATAT CAGTGCAGAG
AAAATAAATG CCCTGGCTTA CCAGAAGGGC TTTGTAGGTA CAACCTCTAA AGCGTACAAT
TACAGCGCTT ATATTTCGGA TGTATTTAAT ATCACGCCTT CCCTGATGGC AATGCTGAGT
TTACGTGCTG ACCGTTTTAC GACGGACGGA ACCTACGCCA TCGCCACCGG CAAATACACC
GGAGAGTATA GCCAGAACTC ACTGTCCCCT AAATTCGGAC TGGTATACCA GGTCGTAAAA
GAGAAAGTAT CCATTTTCGG TAACTACATG AACGGTTTCG TAAACCTGGG CCCTGTAACC
CAACCGGACA ACACGATTCT CACCCTGAAG CCGCAATATG GCAATCAGTG GGAAGGTGGT
GTAAAGGTGG ACCTGATCGA GGGTAAACTG AGTGGAAGTG CCAGCTATTA CGACATCGCT
GTAACTAACT CCACCCGTAC AGAAGTACAG GATGGTAAGA CCTTCACCCG TCAGGACGGT
ACACAACATA GCAAGGGTTA TGAAGCTGAT ATTACTACCA GCCCTGTATC CGGCTTAAAT
ATCGTAGCTG GTTACGCACA TAACGAAAAC AAATATACCA ATGCCAGCCC TGCCCTGCAA
GGCAAATATG TGACCGCCAG TCCTAAAGAT GTAGCAAACA TCTGGATCAG CTATCACCTG
ACACGCGGTA AGGCAAAAGG GCTTGGTTTT GGCGCTGGCG CGAATTATAT CAGCGATTCC
TGGTTTGAGG CGACCAACAC CTTTGTATTG CCTAGCTATA CACTGGTCAA TGCAACCGTA
TATTACGATC AGCCTAAATT CAGATTATCT GTGAAAGCCA ATAATCTGCT GAACCAGGAA
TACTGGAATC CGGTAGGTAC GCCACAAAAA CAACTGAACT TCCTGGGTAG CATCGCCGTG
CGATTCTAG
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| Protein sequence | MRQFFQIFLL LLPFYCLASV NEENDFGTIK GKITTNDNRP ASAVTIMIRG AKKTTLTNED
GTFTISHVPT GTHQLEVSLV GYAPLQEEVS VEKGKVTEIA LQLQVSSTQL KEISITSNQN
KFSRRESEQI ARLPIKNLEN PQVYSVAGKE LIEEQVITER TDLYRNIPGA VPNFAAGGSQ
GMTIRGFSNG MGMRNGMVTS AIVPLNPIIL EKVEVIKGPS GTLFGSNRNT TFGGVFNYVT
KRPYDTFGGE VSLTGGSFQF GRITADINTP LNKEKTLLFR LNAGAQTEGS FQDQGYAKNY
TIAPTITYQL TDRLKLTLDV ELTRASYTTT SFGIDSMSKV TARNFKDLPI GYKRSYINNS
VDVSNGINNI QAQAEYKISD NWTSQTNYLY SEGFYKHLLW TTLSLVSDSI MARTVRNQTP
ETFGNIQLQQ NFIGDFYIGS FRNRMVIGLD YNYNYNQLYR ATVSYDKVNI NNPLPDISAE
KINALAYQKG FVGTTSKAYN YSAYISDVFN ITPSLMAMLS LRADRFTTDG TYAIATGKYT
GEYSQNSLSP KFGLVYQVVK EKVSIFGNYM NGFVNLGPVT QPDNTILTLK PQYGNQWEGG
VKVDLIEGKL SGSASYYDIA VTNSTRTEVQ DGKTFTRQDG TQHSKGYEAD ITTSPVSGLN
IVAGYAHNEN KYTNASPALQ GKYVTASPKD VANIWISYHL TRGKAKGLGF GAGANYISDS
WFEATNTFVL PSYTLVNATV YYDQPKFRLS VKANNLLNQE YWNPVGTPQK QLNFLGSIAV
RF
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