| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2841 |
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| Symbol | |
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| ID | 8359002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3501468 |
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| End bp | 3502874 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965021 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003122521 |
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| Protein GI | 256421868 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000678206 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTG TGCTGCTGAG AGCCCGTTCT ATATTAAATC TGTTCAGGAG CGCGATTGCC
GGTACGGAGA AAGATTTTAC CTCCGGTAGT GTCAATCGCG CCACCTTTCT GTTGTCTGTA
CCATCCATGC TGGAACTGGC GATGGAATCC TTATTTGTGA TGGTAGACCT TCTTTTTGTG
AGCAGCCTGG GTGAAAGGGC TATCACCATT GTAGGGATCG TCAATTCAGT GGTCATCATT
TTCCATTCTG TAGCGATGGG CCTGAGTATT GCCGCTACTG CTGTTATATC CAGGCGGGTA
GGAGAGAAGA AACCACGTAC GGCTGGCCTT GCAGCGATGC AGGCCATCTA CCTGGGTATC
ACGATCTCTG TCATATTCAG CGCACTATCC ATCAGCTTTA ACAGAAGTAT CCTGCACCTG
GCAGGCGCTT CCGCCGAACT CGTACATGAG GGCGATCTGT TCTCACGTAT TATGTTTGGC
TGTATTCTGC TGGTGGTGAT GCGCGTATTA ATGAATGGTA TATTCAGAGG TGCAGGTAAT
GCAGCCATGG CGATGCGTAC ATTGTTATTG TCCAATGCTG TGAATGCCGT ATTGTGTGCG
GTACTCATCT TTGGTGTAGG TCCTATTCCG TCCTTTGGAT TGTTAGGCGC AGCAATGGCT
ACCGGTATCG CGAATCTTGT AGGCGTAAGT TATCAATGCT GGTATTTTGC AAAGGCGGAA
AAAGTGATCA AGATCGGCAG ACAGCAACTG ATGCTGGTGC CGGCTATCAT TAAACGTATA
TGTAAACTGG CAGTCTCCGG TACACTACAA TACATCATTC CTTCTTCCAG CCGTTTTCTG
ATGATTATCA TCGTTGCGAA ACTGGGAGAG AGTGTATTAG CGGGCTATAT TGTGGCGAAC
CGTATTATCA TGTTTACGGT ATTACCCGCA TGGGGTATCG CTAATGCTGC CGGTGTCCTG
ACAGGGCAGA ACCTGGGTGC TGGTCAGCCG GAAAGGGCAG AGCAATCTGT CTGGAAAACC
GGCGCTTTCA ATATGTGTTT TCTGGGTAGT ATCGCCTTAT TTCTGCTGGC CTCCGGAGAA
AGTATTGTAC ACATTTTTAC CCGCGAACAA ACCGTTGCGC AGCATGCGGC GCTTTATCTC
CGTTATATGT CTATTGCTTA TTTTTTCTTT GGATATACAA TGGTGATCTC CCGCTCACTG
AATGCCGCAG GTTCTGTGAA TGTGGTCACC CTGTTATATG TGCTGATGTT TTACATAACA
CAGCTGCCCC TGGCCTGGTT CTTAGGTATA CATTCCAATT GGGGACCACA GGGTATCTTC
ATTGCTATAC TGGCATCTGA AATAGTATTG GCCGCTGCTT GTCTTATCGT ATTCCGTAGC
GGTAAATGGA AAAAAGTAAA GATCTGA
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| Protein sequence | MNAVLLRARS ILNLFRSAIA GTEKDFTSGS VNRATFLLSV PSMLELAMES LFVMVDLLFV
SSLGERAITI VGIVNSVVII FHSVAMGLSI AATAVISRRV GEKKPRTAGL AAMQAIYLGI
TISVIFSALS ISFNRSILHL AGASAELVHE GDLFSRIMFG CILLVVMRVL MNGIFRGAGN
AAMAMRTLLL SNAVNAVLCA VLIFGVGPIP SFGLLGAAMA TGIANLVGVS YQCWYFAKAE
KVIKIGRQQL MLVPAIIKRI CKLAVSGTLQ YIIPSSSRFL MIIIVAKLGE SVLAGYIVAN
RIIMFTVLPA WGIANAAGVL TGQNLGAGQP ERAEQSVWKT GAFNMCFLGS IALFLLASGE
SIVHIFTREQ TVAQHAALYL RYMSIAYFFF GYTMVISRSL NAAGSVNVVT LLYVLMFYIT
QLPLAWFLGI HSNWGPQGIF IAILASEIVL AAACLIVFRS GKWKKVKI
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