Gene Cpin_2837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2837 
Symbol 
ID8358998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3496174 
End bp3497997 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content47% 
IMG OID644965017 
ProductIucA/IucC family protein 
Protein accessionYP_003122517 
Protein GI256421864 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4264] Siderophore synthetase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.18665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATA CAGTTACTCC CCGGGAAGCA GTTGCGCACC TGCAACCGGA AATATGGGCG 
CGTGTCAACC GCCTGCACAT CCGTAAGATG ATTGCGGAAT ATGCGCATGA ACAGATCATA
CAACCTTCCT ACAGACATGT AAAACAGGGA TGGGTCGTGT ATGTGCTGAC GTCTGATCAA
CCTGATATAG AATATCGCTT CCGCGCAAAA ATATTACACC TGAATCATTG GTATATCCTT
ACGGAGTCCA TTGAAAAGAT GGTAAACGGA CAGCCCGCTG CGCTGGATGC ATTGGCATTT
ATCGTAGAGT TCAGTGAACA ATTGAATATG GATCCCTCCA TGCTGCCGGT ATATATGGAA
GAAGTGGCAG CAACCTTGTA TGGCAGTGCT TATATGCATG TGCAGGGAGG TCCTTCTTCC
GCATACCTGG CTGGCGCGGG CTACCAGGAA ATAGAACATG CCATGACCGG GCATCCCCGC
TTTATTGCCA ATAATGGCAG GGTGGGTTTT GATGCCGGTG ATTACCGCAG TTTTGCACCG
GAAGCTGCGC AGCCGATGCC TTTGTTGTGG TTGGCCGGAC ATCAAAGTTG CACGGAATTT
ACCAGCATTG CCCCACTGGA TTATGCACAG GTGAAGCAAC AGGAACTGGG TAGCCAGGCC
GCTGATTTTG ATGCCATACT TAACGGCAAA GGCTTACAGC CGGCGGAATA CATTTATATA
CCAGTGCATC CCTGGCAATG GTATAATAAG CTGGCGGGTA TTTTTGCACC TGATGTAGCG
GCTAATAAAC TGGTATTACT GGGATATGGG CAGGATCAGT ACCTGCCACA GCAATCTATA
CGTACCTTCT TCAATACAGA TCATCCGGAG AAGTATTATG TCAAGACGGC CCTTTCTATT
CTGAATATGG GGTATGTACG TGGCTTATCG CCTTATTTTA TGCGTACGAC ACCTGGTATT
AACGAATGGG TGAATAACCT GGTATTACAG GATGCTTACC TTCAGGAGAC CGGCTTCTGT
ACGCTACGGG AGATTGCCAC TACCGGCTAT TCGAATCATT ACTATGAGCA GGCGACGAAG
ACAGACAATC CATACAAGAA AATGCTGGCT GCATTATGGA GAGAAAGTCC TTTATCCAAA
ATGAAAGCTG GTCAGCGTAT TATGACCATG GCAGCCCTGC TGCATGTTGA TACACAGGGA
GAGGCGTTGC TGCCCGAACT GATACAACTT TCCGGTCTGG ATGCAGATGC GTGGTTACAG
CAATATATAC ATGTTTACAT GAGTCCTTTG CTGCATTGTT TCTATCAGCA TGATATGGTG
TTTATGCCGC ATGGCGAGAA CATCATACTC GTACTGGAGA ATCATGTGCC GGTACGCACG
ATCATGAAAG ATATAGGAGA GGAAGTATCT GTACTCAGTG CAGAGGTACC GTTGCCGGAA
ATTGCCAGTC GCTTACGTGT GAGCGTACCT GACGAAGTAA GAACCCTGCC ATTATTCACA
CAGATATTCG ATGGTATTTT CCGCTTTATA GCGGCCATTC TCGAAGAGCA TATGGATTAT
CCGGAGAAAA GTTTCTGGGA ACTGGTAGCA CAGGTAATAC TGACATACAG GGAAAGACAT
CCACAACTGG AACAGAAGTT TCAGCAGTAT GACCTCTTTG TAAAAGAGAT TAATCCGGAT
GCATTGAACC GCTTACAGAT CAGTAATAAC CGGCAGTTAC GCAACAGGGC AAATCCTTTC
GATGTGCCTG CTATTGGCAT TGTAGAAAAC CCGATAGCGG CTTTCAGTCC TTCGCCGTCT
TACACTAAAA TGGCCACCGT ATGA
 
Protein sequence
MFNTVTPREA VAHLQPEIWA RVNRLHIRKM IAEYAHEQII QPSYRHVKQG WVVYVLTSDQ 
PDIEYRFRAK ILHLNHWYIL TESIEKMVNG QPAALDALAF IVEFSEQLNM DPSMLPVYME
EVAATLYGSA YMHVQGGPSS AYLAGAGYQE IEHAMTGHPR FIANNGRVGF DAGDYRSFAP
EAAQPMPLLW LAGHQSCTEF TSIAPLDYAQ VKQQELGSQA ADFDAILNGK GLQPAEYIYI
PVHPWQWYNK LAGIFAPDVA ANKLVLLGYG QDQYLPQQSI RTFFNTDHPE KYYVKTALSI
LNMGYVRGLS PYFMRTTPGI NEWVNNLVLQ DAYLQETGFC TLREIATTGY SNHYYEQATK
TDNPYKKMLA ALWRESPLSK MKAGQRIMTM AALLHVDTQG EALLPELIQL SGLDADAWLQ
QYIHVYMSPL LHCFYQHDMV FMPHGENIIL VLENHVPVRT IMKDIGEEVS VLSAEVPLPE
IASRLRVSVP DEVRTLPLFT QIFDGIFRFI AAILEEHMDY PEKSFWELVA QVILTYRERH
PQLEQKFQQY DLFVKEINPD ALNRLQISNN RQLRNRANPF DVPAIGIVEN PIAAFSPSPS
YTKMATV