| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2821 |
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| Symbol | |
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| ID | 8358982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3477042 |
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| End bp | 3478943 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965001 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003122501 |
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| Protein GI | 256421848 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.226587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA AGATAAATAA AGTTACCAGG ATATTGTTGC TGACGCTGGC CTTACACGTA
TCACAGGGAT GTACTAAAGA GTTCCTGAAG CCTGACCCGC AGTCATTCTA TGAGCCCTCT
ATTACTTTTA CTTCAAAAGA AGGATTGCAG GCCGCCATCA CCAGTTGTAA CAGGAACCTG
ACTTACGTAT GGACAGGAGA AGGAGCACCT TTGCTGACTG ACCTGCTTTT TTCTGATGTA
GCGATAGATG GTACGACAGA CAAGTCAGGT CCTGCACAGG ACCTGAATGC CATGATCACG
CCTACTTCCA ATAATAACGA CGTCAATACC AATAAGATCA ACTTCTTCTG GTTTGAGGGG
TATAAGGGGA TTAAATATGC CAATACGATT GTCACCAATC TGCCGCGTGT ACAGGGGCTT
GATACGACGC TGCGTAATCA GATGATGGGC ATGGCTTATT TCCACCGCAC CTTCCGCTAT
ATGTGGCTGA TATTCGACTT CGGAGATATT CCTTTACTGA CCAAAGAGAT CACTTCGCCT
AAGTTCAATT TCCGCTCTAC TAAAAGAGGC GTCATTTTGC AGCAATTGGT AGCTGATATG
GAGTTCGCCG TACGACATGT ACCTGCCAAT GGCGACTATG GTACGGTCAC AAAAGGCGCC
TGTCAGCAGT TACTGATCAA ATGTTACCTG GCTGCCGGTG AGTTTGACAA AGCGATTGCA
GTGGCGAATG ACCTTATTAA CAGTGCTGGC TATTCCCTGA TGACACAACC TTTCGGCACA
TTTGTCAATC CGGCGCCAGC CATTCATAAC ATCACCAGGA ATGTGATATG GGACCTGCAC
CGCGGACAGA ATAAATCCAT TGCGGCGAAC AGGGAAACGA TCTTCAACCT GATCAGCAGA
GAAGAATTTG CCAATAGCAG ACAGAATATG GTGACCATGC GCAATGCGCT TCCTTTCTAT
TCCGGTACGG GCAATCAGCT GATCAGTACC CCTTCCGGTA AACAAGGCAT GAGTACCAGC
TATAGTCAGA CGAAGGATAA GATAGACCTG CGTAAGACCT ATGGCAGAGG GATTGCCAAA
ACAAGACCTA CCTGGTATAG CAGCAATACG ATCTGGACGG ATACCAGCGA TTTGCGTCAC
AACAGTGCCG TTGGTAACTG GATGCATATG GAAGATATGG TGTATAACCA TCCCTCGCTG
CTGAGCAGCG GTGACCAGTA CTACGGAAAG CAACTGCAGA AATACAATAG CTCCGGTAAG
CTGTTGGTGA CCGACACCAT CAGGACCTGG TTTGACTGGC CACATTATAA GGTATGGGTA
GAGACACCGC GTTCTGAAAC AGTAGATAAC TATGATGGCG GTGCAAGCGA CTGGTACATC
TACAGACTGG CAGAGACCTA TCTGCTGCGT GCAGAGGCTT ATTTCTGGAA AGGCAGGTAT
GCAGAAGCCG CTGAAGATGT AAATGCCATT CGTCGTCGTG CGCATTGTAC ACAGATGTTT
GCACCAGGCG AGATTAACAT TGGTGTAATC CTGGATGAAA GGGCAAGGGA GCTTTATTAT
GAAGAATTAA GACATGTGGA ATTAAGCCGT ATCTCTTACA TTTTTGCTAC TACGAACATC
CCGGATGAAT TCGGGAAAAC GTACCAGGTA GATAATCTGT CTAAAAGCAG TTACTGGTTT
GAAAGGATCA CCCGGTACAA TAACTTCTAT AATAAGGGTG TAAAGACCGT ATATGGTACG
CAGTTTACGG CAAGTCCTTA TCATATCTTA TGGCCTGTAC CACAATCAGA TATTGATGCC
AATAGAAATG GCAGGTTAAA TCAGAATTTC GGATATTCCG GATATGAGCT GAACCAGGCG
CCGATTGATA ACCTGGAAGA GGCAATAAGG GTACAGGATT AA
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| Protein sequence | MKIKINKVTR ILLLTLALHV SQGCTKEFLK PDPQSFYEPS ITFTSKEGLQ AAITSCNRNL
TYVWTGEGAP LLTDLLFSDV AIDGTTDKSG PAQDLNAMIT PTSNNNDVNT NKINFFWFEG
YKGIKYANTI VTNLPRVQGL DTTLRNQMMG MAYFHRTFRY MWLIFDFGDI PLLTKEITSP
KFNFRSTKRG VILQQLVADM EFAVRHVPAN GDYGTVTKGA CQQLLIKCYL AAGEFDKAIA
VANDLINSAG YSLMTQPFGT FVNPAPAIHN ITRNVIWDLH RGQNKSIAAN RETIFNLISR
EEFANSRQNM VTMRNALPFY SGTGNQLIST PSGKQGMSTS YSQTKDKIDL RKTYGRGIAK
TRPTWYSSNT IWTDTSDLRH NSAVGNWMHM EDMVYNHPSL LSSGDQYYGK QLQKYNSSGK
LLVTDTIRTW FDWPHYKVWV ETPRSETVDN YDGGASDWYI YRLAETYLLR AEAYFWKGRY
AEAAEDVNAI RRRAHCTQMF APGEINIGVI LDERARELYY EELRHVELSR ISYIFATTNI
PDEFGKTYQV DNLSKSSYWF ERITRYNNFY NKGVKTVYGT QFTASPYHIL WPVPQSDIDA
NRNGRLNQNF GYSGYELNQA PIDNLEEAIR VQD
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