| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2818 |
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| Symbol | |
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| ID | 8358979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3472080 |
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| End bp | 3472631 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964998 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122498 |
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| Protein GI | 256421845 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.246022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACGT TTAATACTAT TTCCGCGCTG AAAGAAGGAG ATCCTTCCGT TTTCAGTGAT
ATATTCAATG AATATCACCG GAAGGTGTAT TTCTACGTGC TCTCCAAGAC CCACTCTCCC
TATATCGCAG AAGAAACTAC CCAGATTACC TTTATCAAAC TATGGGATTA CAGGCATAAA
CTGGATGAAT CAGAGCCGGT CAGCCGTTTG ATCTTCCATA TTGCCCGGGC CACCTCAATC
GATCTCCTCA GAAAGGAAGC CGTTAAAGGC CGCTTTCTCA AACAGGAGAA CCCGCCCGAA
TCAGACACCG TTAATATATC CGATACCATT GAAGCACGCG AACAGCTGAT CAGGGTGCGC
CAGGCAGTAA ATAGTATGCC CCCTGTCAGA AGAAAAGTCT TTGAGCTCAG CCGTTACGAA
TTTAAATCCT ACAAAGAAAT TGCCGCACAA CTGTCCCTTT CGGTTAAAAC GGTAGAGAAT
CATATGTCTT TAGCTATCAG TTATTTAAGG AGCGTGCTGT TACTGTTGTT CCTCCTGCTG
TACCTTATCT GA
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| Protein sequence | MSTFNTISAL KEGDPSVFSD IFNEYHRKVY FYVLSKTHSP YIAEETTQIT FIKLWDYRHK
LDESEPVSRL IFHIARATSI DLLRKEAVKG RFLKQENPPE SDTVNISDTI EAREQLIRVR
QAVNSMPPVR RKVFELSRYE FKSYKEIAAQ LSLSVKTVEN HMSLAISYLR SVLLLLFLLL
YLI
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