Gene Cpin_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2817 
Symbol 
ID8358978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3470544 
End bp3471608 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content45% 
IMG OID644964997 
Producthypothetical protein 
Protein accessionYP_003122497 
Protein GI256421844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.285474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGG GCCAACGCTG GACACTAGAC ACTACATCTT TAATCACACA TAACATTAAC 
CTCATGAATC TCAAAGACAT TTTTACCAAG AAATCTGAAA TATGGACTTA TGCCCCTCTG
ACGCCTGACC AGATACCCGA TGAACCTAAA ACCGTAGAAG ACATCCCGAT GAACAAAGGG
TATCTGAACA TTACCGTACG TTCTATGCAC ATTACCGACG TACGTAAGTT CACTTCGACT
TATTACGGTG TCGTACACAG TGTCGTAAAG CTGAATCACC AGGGAGGTAA AGACGCAGTT
TTTCAGAATG TCACCTCTCC TTCCGAACTC AAAAAGCTGG ATGGCAAACA CCTCGACAGG
GTGATCGTTA AAAATATACC GATTGTTAGC CTGGTACCTT ACCGCGGAGA AGAGGTCAGT
CTGGAACTGG GACTTTTCTC TGTGAAACAG TCCGACCTGG CAGCTCCTTT CATTGACCTC
CTGGAAACCA TGGCCTCCAC CGCCGGCGTA TCCGTACTCA GTGCAGCCGT ACCTTTTGTA
GAGCCCCTGA AAAAAGGAAT CGACGGTATC ATCGGAACGG ATGCTGACTC CGCATTGGAG
ATCGGTATTG CCACCACCTT CAATCCGCCT AAAACAGGCT GGTTTGTAGT CATGCGTACA
CCCAAACAAA GCAACATTAT CCCTACACTG GAAGTTACCC CTTCTGACTA TGTACTTGTA
GATAAAAACT CAAAAGAGCC GCTGAAAGAT TATCCATATG TGATCTATTC CATCGCATAT
AGCCGGGAAC GAAATGACTG GTTTAAACTG CCTTATCTGA TGGATAGCTA TCAGGCCATT
CAAAAAGCGA TTCAGGATGG AAAAGATACA GATGCAGAGG ATAGTCTGAA GGTATTTAAG
CGATATGCCA TCACCAGCCC GGATATTTTA AGAGAAGACG CGATACGTAT CTGTAAACTG
GTGGAAGAGG AATTAAAGAG TGTACTCTCC TTTACACTGG AGACGAAATC AATTGCACCT
GGTAAACAGC TACGGGATCT GGAATCTTAT CCACTTTACC AATAG
 
Protein sequence
MDPGQRWTLD TTSLITHNIN LMNLKDIFTK KSEIWTYAPL TPDQIPDEPK TVEDIPMNKG 
YLNITVRSMH ITDVRKFTST YYGVVHSVVK LNHQGGKDAV FQNVTSPSEL KKLDGKHLDR
VIVKNIPIVS LVPYRGEEVS LELGLFSVKQ SDLAAPFIDL LETMASTAGV SVLSAAVPFV
EPLKKGIDGI IGTDADSALE IGIATTFNPP KTGWFVVMRT PKQSNIIPTL EVTPSDYVLV
DKNSKEPLKD YPYVIYSIAY SRERNDWFKL PYLMDSYQAI QKAIQDGKDT DAEDSLKVFK
RYAITSPDIL REDAIRICKL VEEELKSVLS FTLETKSIAP GKQLRDLESY PLYQ