Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2817 |
Symbol | |
ID | 8358978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3470544 |
End bp | 3471608 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644964997 |
Product | hypothetical protein |
Protein accession | YP_003122497 |
Protein GI | 256421844 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.285474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCGG GCCAACGCTG GACACTAGAC ACTACATCTT TAATCACACA TAACATTAAC CTCATGAATC TCAAAGACAT TTTTACCAAG AAATCTGAAA TATGGACTTA TGCCCCTCTG ACGCCTGACC AGATACCCGA TGAACCTAAA ACCGTAGAAG ACATCCCGAT GAACAAAGGG TATCTGAACA TTACCGTACG TTCTATGCAC ATTACCGACG TACGTAAGTT CACTTCGACT TATTACGGTG TCGTACACAG TGTCGTAAAG CTGAATCACC AGGGAGGTAA AGACGCAGTT TTTCAGAATG TCACCTCTCC TTCCGAACTC AAAAAGCTGG ATGGCAAACA CCTCGACAGG GTGATCGTTA AAAATATACC GATTGTTAGC CTGGTACCTT ACCGCGGAGA AGAGGTCAGT CTGGAACTGG GACTTTTCTC TGTGAAACAG TCCGACCTGG CAGCTCCTTT CATTGACCTC CTGGAAACCA TGGCCTCCAC CGCCGGCGTA TCCGTACTCA GTGCAGCCGT ACCTTTTGTA GAGCCCCTGA AAAAAGGAAT CGACGGTATC ATCGGAACGG ATGCTGACTC CGCATTGGAG ATCGGTATTG CCACCACCTT CAATCCGCCT AAAACAGGCT GGTTTGTAGT CATGCGTACA CCCAAACAAA GCAACATTAT CCCTACACTG GAAGTTACCC CTTCTGACTA TGTACTTGTA GATAAAAACT CAAAAGAGCC GCTGAAAGAT TATCCATATG TGATCTATTC CATCGCATAT AGCCGGGAAC GAAATGACTG GTTTAAACTG CCTTATCTGA TGGATAGCTA TCAGGCCATT CAAAAAGCGA TTCAGGATGG AAAAGATACA GATGCAGAGG ATAGTCTGAA GGTATTTAAG CGATATGCCA TCACCAGCCC GGATATTTTA AGAGAAGACG CGATACGTAT CTGTAAACTG GTGGAAGAGG AATTAAAGAG TGTACTCTCC TTTACACTGG AGACGAAATC AATTGCACCT GGTAAACAGC TACGGGATCT GGAATCTTAT CCACTTTACC AATAG
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Protein sequence | MDPGQRWTLD TTSLITHNIN LMNLKDIFTK KSEIWTYAPL TPDQIPDEPK TVEDIPMNKG YLNITVRSMH ITDVRKFTST YYGVVHSVVK LNHQGGKDAV FQNVTSPSEL KKLDGKHLDR VIVKNIPIVS LVPYRGEEVS LELGLFSVKQ SDLAAPFIDL LETMASTAGV SVLSAAVPFV EPLKKGIDGI IGTDADSALE IGIATTFNPP KTGWFVVMRT PKQSNIIPTL EVTPSDYVLV DKNSKEPLKD YPYVIYSIAY SRERNDWFKL PYLMDSYQAI QKAIQDGKDT DAEDSLKVFK RYAITSPDIL REDAIRICKL VEEELKSVLS FTLETKSIAP GKQLRDLESY PLYQ
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