| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2806 |
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| Symbol | |
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| ID | 8358967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3457855 |
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| End bp | 3459384 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964986 |
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| Product | WD40 domain protein beta Propeller |
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| Protein accession | YP_003122486 |
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| Protein GI | 256421833 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAC AATTGTACTT CGCGATATTG GCCCTATTGC TGTTCAACCT CTCTTCCGTT
CCCCTTGCGG CACAAAACAC CGGTATCTTT GACGCCCATG GCGATATTGG TCAGGTGAAA
CATCCGGGTA GTCTGCAATA CGATCCCAAA ACACAACAAT ACACCATTAC CGGCGCCGGT
ACGAACATGT GGTTTGGCAG CGATGAATGT CATTTTGCCT GGAAAAAGAT GAAAGGTGAT
TTTATCTTAC GTACCCGTGC ACAGTTTAAC GGGAAAGGTC AGGAAGCACA CCGCAAATGG
GGACTGATGG TACGTAGTAG CCTGGATACA GGTGCACAAC ATGTCAATGG TGTGGTACAC
GGCGACGGAC TCACCTCTCT TCAGTACAGA AAAACCAGCG GCGCGAATAC AGAAGAGATC
AAAACCGGTG TGAGTGGCGC GGACATTGTC CAGCTGGAAA GAAAAGGAAA TACCTACACC
TTATCCGTTG CGCGTAATGG CGTTCCTTTT AGTAGTGAAA CACTCGATGA TATGCCTCTG
GGCGATGAAG TGTTTGCAGG GCTTTTCGTC TGTTCACACA ACGCCGATGT AACAGAAAAA
GCGGTATTCA GCAATGTACG GCTGACAGCA CCTGCACCTG CGGACCTGAA GGCTTACAAA
CAGTATATAG GCAGTCAGCT GGAACTGATG GATATTGCCA CCCAGCATAG TATCATCGTT
TATCAGACGC CAGGATCTAT ACAGGCGCCT AACTGGAACC AGGATGGCCA ATCCCTGATC
TATAACAAAG AAGGGAAATT ATATCAGTTC GACCTGCGTA CCCGGACACC TTCACCGATC
AATACCGGTG TAGCAAAACA GAATAACAAT GATCACGTGT TATCTTTTGA CGGAAAGATG
CTGGCCATCA GTAGCGGTGA AGGAGAAAAC GGGGCTTCTG TAGGATATGT CGTTCCACAT
ACCGGCGGAG ATCCCGTTCG TATCAATAAG GTCGGTCCGT CTTATATGCA TGGCTGGTCG
CCTGATGGGA AATACCTGGT CTTTACCGGA CAAAGGAACA ACGACTTTGA CATATACCGG
GTGCCTGCAA AGGGTGGAGA AGAAGTACGG CTGACGACTG CACCTGGTCT TGACGACGGC
CCCGAATATA CACCCGACGG TAAGTACATT TATTTCAATT CCGTGCGTAG CGGTATGATG
CAGATCTGGC GTATGGCCCC TGATGGCAGT AATCAGACGC AGATAACAAA TGATGACTTT
CATAACTGGT TTCCGCATAT CTCACCGGAT GGCAAATGGA TCGTTTTCCT CTCCTTTCTG
AAGGAAGAAG TAGACGCATC GGACCACCCT TTCTATAAAC ATGTATATCT GCGGCTGATG
CCGGCAACGG GAGGCCCGGC GAAAGTAATT GCCTATCTCT ATGGAGGACA GGGCACGATC
AATACGCCTT CCTGGTCGCC TGACAGTAGG CGTATTGCTT TCATCAGCAA TACAAATCTG
TTGTTTCCTG TATTTCCGAT GGAAAAGTAA
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| Protein sequence | MGKQLYFAIL ALLLFNLSSV PLAAQNTGIF DAHGDIGQVK HPGSLQYDPK TQQYTITGAG
TNMWFGSDEC HFAWKKMKGD FILRTRAQFN GKGQEAHRKW GLMVRSSLDT GAQHVNGVVH
GDGLTSLQYR KTSGANTEEI KTGVSGADIV QLERKGNTYT LSVARNGVPF SSETLDDMPL
GDEVFAGLFV CSHNADVTEK AVFSNVRLTA PAPADLKAYK QYIGSQLELM DIATQHSIIV
YQTPGSIQAP NWNQDGQSLI YNKEGKLYQF DLRTRTPSPI NTGVAKQNNN DHVLSFDGKM
LAISSGEGEN GASVGYVVPH TGGDPVRINK VGPSYMHGWS PDGKYLVFTG QRNNDFDIYR
VPAKGGEEVR LTTAPGLDDG PEYTPDGKYI YFNSVRSGMM QIWRMAPDGS NQTQITNDDF
HNWFPHISPD GKWIVFLSFL KEEVDASDHP FYKHVYLRLM PATGGPAKVI AYLYGGQGTI
NTPSWSPDSR RIAFISNTNL LFPVFPMEK
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